Pairwise Alignments

Query, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 541 a.a., ATP-dependent DNA ligase from Caulobacter crescentus NA1000

 Score =  609 bits (1571), Expect = e-179
 Identities = 320/544 (58%), Positives = 387/544 (71%), Gaps = 12/544 (2%)

Query: 1   MKAFATLLDRLVLTPSRNGKLKLLTDYFRDTPDPDRGYGLAAIAGTLDLKSVKPAMLREL 60
           M+AFA LLDRL LT SRN KL L+ D+ R TPDPDRGY LAA+ G L   + KPA +R+ 
Sbjct: 3   MRAFAHLLDRLSLTSSRNAKLILIQDHLRQTPDPDRGYALAALTGALSFNAAKPAFIRKA 62

Query: 61  VMERMDEVLFRYSYDYVGDLAETISLVWGNIGGVDDAEA-QDPRLGEVVTLMNSLGRTEV 119
           +  RMD  LF +SYD+VGDLAET+SLVW          A + P L EV+  ++S  R EV
Sbjct: 63  IEARMDPQLFAWSYDFVGDLAETVSLVWPAPSSRKWLGANRPPELSEVIDALHSASRPEV 122

Query: 120 RGAVRDLLDRLDTSSRFAFLKLATGSLRIGVSARLARQALADFADKDITEIETLWHGLTP 179
           +  +   LD LD   R+A LKL TG LR+GVS+RLA+QA A+    DI EIE +WH L P
Sbjct: 123 QRLIEGWLDALDPDGRWALLKLMTGGLRVGVSSRLAKQACANLGGVDIGEIEEIWHALAP 182

Query: 180 PYTTLFSWLEGNSDRPLLATPAIFHSVMLATPVADG-DLDALDPADYAAEWKWDGIRVQ- 237
           PY  LF+WLEG S+RP    P  F  VMLA P+ +  D   LDPADY AEWKWDGIRVQ 
Sbjct: 183 PYGDLFAWLEGRSERPSPDAPGRFRPVMLAQPLDEEVDFQKLDPADYLAEWKWDGIRVQA 242

Query: 238 LSRAGETRKLYSRSGDDISGAFPDVLDAIEFEGVMDGELLVGGTARSNNLTRTFSDLQQR 297
           +S  GE R+LY+R+GDDIS +FPDV++A++FEG +DGELLV      +    +F DLQQR
Sbjct: 243 VSERGE-RRLYTRTGDDISASFPDVVEALDFEGAIDGELLV----LRDGALASFGDLQQR 297

Query: 298 LNRKTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERRNRLSDIIERAPHDRFDLSPL 357
           LNRKTV AK+   +PA IRAYDLL +GE+D+RA  +  RR RL   +      R DLSPL
Sbjct: 298 LNRKTVDAKLLAAFPAGIRAYDLLMDGETDLRALPFETRRARLEAFVASLKTSRIDLSPL 357

Query: 358 IGFSSWSELDTLRAAPPDP---VIEGVMIKRRDSTYQAGRAKGPWFKWKRDPYNIDAVMM 414
             FS+W  L  LR  PP+    + EG+M+KRRDS Y+ GR KGPWFKWKRDP  IDAV+M
Sbjct: 358 QPFSTWKALAALRLEPPEGDARLSEGLMLKRRDSVYEPGRPKGPWFKWKRDPRLIDAVLM 417

Query: 415 YAQRGHGKRSSYYSDFTFGVWAEGEDGEQ-LVPVGKAYFGFTDAELEVLDKFVRDNTVER 473
           YAQRGHGKRSS+YSD+TFGVW E EDG + L PVGKAYFGFTD EL+ +DKFVRD+T+ER
Sbjct: 418 YAQRGHGKRSSFYSDYTFGVWREDEDGRRTLTPVGKAYFGFTDEELKQIDKFVRDHTIER 477

Query: 474 FGPVRAVRATPDFGFVLEVAFEGINRSTRHKSGVAMRFPRIARLRADKLPAEADRLSTLV 533
           FGPVR+VRA  D G + EVAFEG+ RS+RHKSGVAMRFPRI R+R DK   EAD L+TL 
Sbjct: 478 FGPVRSVRADADVGLIFEVAFEGLQRSSRHKSGVAMRFPRINRIRWDKPAREADELATLE 537

Query: 534 AMID 537
           AM+D
Sbjct: 538 AMLD 541