Pairwise Alignments

Query, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 548 a.a., ATP-dependent DNA ligase from Ralstonia sp. UNC404CL21Col

 Score =  329 bits (843), Expect = 2e-94
 Identities = 217/559 (38%), Positives = 297/559 (53%), Gaps = 37/559 (6%)

Query: 1   MKAFATLLDRLVLTPSRNGKLKLLTDYFRDTPDPDRGYGLAAIAGTLDLKSVKPAMLREL 60
           MKAFA L  +L  T S NGKL  L  Y R  PD D  + +  +AG    + V   +L   
Sbjct: 1   MKAFADLYAQLDATTSSNGKLAALVAYLRTAPDADAAWAVYFLAGGKPRQLVPVRVLASF 60

Query: 61  VMER--MDEVLFRYSYDYVGDLAETISLVWGNIGGVDDAEAQDPRLGEVVTLMNSLGRTE 118
                 + E LF   Y  VGDLAETI+LV  +    DDA   +     ++ L        
Sbjct: 61  AQTTSGLPEWLFDECYQAVGDLAETIALVLPDADHADDASLAEWMEARLLPLRGQPPEA- 119

Query: 119 VRGAVRDLLDRLDTSSRFAFLKLATGSLRIGVSARLARQALADFADKDITEIETLWHGLT 178
           V   + +L   L   +R   +KL TG+ R+GVS  L  +ALA+    D   +     G  
Sbjct: 120 VLPRLAELCRGLPLHARLVLMKLITGAFRVGVSKLLVTRALAEMGGTDPKHVAQRLMG-- 177

Query: 179 PPYTTLFSWLEGNSDRPLLATPAIF---------HSVMLATPVADGDLDALD-----PAD 224
             YT +         R LLA  ++          +   LA P+   D++A D     PA+
Sbjct: 178 --YTDIGQAPTAERYRALLADASVDGHALDTGHPYPFFLAHPL-QADVEAFDTLLGTPAE 234

Query: 225 YAAEWKWDGIRVQLSRAGETRKLYSRSGDDISGAFPDVLDAIEF---EGVMDGELLVGGT 281
           +  EWKWDGIR QL R  ++  L+SR  + I+  FP++    E      V+DGE++V   
Sbjct: 235 WQIEWKWDGIRAQLVRRADSAWLWSRGEELITDRFPELSAMAEVLPPGTVLDGEIVVWQA 294

Query: 282 ARSNNLTRTFSDLQQRLNRKTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERRNRLS 341
            R     + F+ LQQR+ RKT+ A++  + PA + AYDLL     D+R     ERR +L 
Sbjct: 295 GR----VQPFALLQQRIGRKTLNARVLREAPAVLLAYDLLEWQGQDLREHPQSERRAQLE 350

Query: 342 DIIERAPHDRFDLSPLIGFSSWSELDTLRAAPPDPVIEGVMIKRRDSTYQAGRAK--GPW 399
            +I    H   +LSPL+    W  L   R A  +  +EG+M+KRRD+ Y  GR K  G W
Sbjct: 351 RVIADCIHPALELSPLLEGDDWQHLAQQREASRELGVEGLMLKRRDARYGVGRTKDVGVW 410

Query: 400 FKWKRDPYNIDAVMMYAQRGHGKRSSYYSDFTFGVWAEGED--GEQLVPVGKAYFGFTDA 457
           +KWK DP+++DAV++YAQRGHG+R+S Y+D+TF VW    D    +LVP  KAY G +DA
Sbjct: 411 WKWKIDPFSVDAVLIYAQRGHGRRASLYTDYTFAVWDAPPDVPERKLVPFAKAYSGLSDA 470

Query: 458 ELEVLDKFVRDNTVERFGPVRAVRATPDFGFVLEVAFEGINRSTRHKSGVAMRFPRIARL 517
           E+  +D  +R  TVE FGPVR+V  T     V E+ FEGI RS RHKSG+A+RFPR+ R 
Sbjct: 471 EIRQVDALIRKTTVESFGPVRSVAPT----LVFELGFEGIARSPRHKSGIAVRFPRMLRW 526

Query: 518 RADKLPAEADRLSTLVAMI 536
           R DK  AEAD L TL  ++
Sbjct: 527 RHDKPVAEADTLQTLEGLL 545