Pairwise Alignments

Query, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 867 a.a., DNA ligase D from Ralstonia sp. UNC404CL21Col

 Score = 57.0 bits (136), Expect = 3e-12
 Identities = 76/257 (29%), Positives = 110/257 (42%), Gaps = 37/257 (14%)

Query: 228 EWKWDGIRVQLSRAGETRKLYSRSGDDISGAFP---DVLDAIEF-EGVMDGELLVGGTAR 283
           E K+DG R+     G T +L+SR+G D +   P     L A+   E  +DGE++V G   
Sbjct: 252 EVKFDGYRILARIDGNTVRLFSRNGRDWTAKLPRQARTLPALGLREAWLDGEVVVMG--- 308

Query: 284 SNNLTRTFSDLQQRLNR-KTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERRNRLSD 342
                R   D Q   N  +T  A+    Y      +D+ F    D+R     ERR  L  
Sbjct: 309 ----ERGVPDFQALQNAFETAHAEHIAYY-----LFDIPFCNGMDLRGVPLRERRALLQR 359

Query: 343 IIERAPHDRFDLSPLIGFSSWSELDTLRAAPPDPV-------IEGVMIKRRDSTYQAGRA 395
           I E AP D  D   ++ FS      T  AAP D +       +EGV+ KR D+ Y+AGR+
Sbjct: 360 IFEAAPGD-LDRDAVL-FSG-----TFNAAPEDLLSSACSMSLEGVIGKRADAPYRAGRS 412

Query: 396 KGPWFKWKRDPYNIDAVMMYAQRGHGKRSSYYSDFTFGVWAEGEDGEQLVPVGKAYFGFT 455
              W K K        +  Y+    G RS  +     GV+   +D  +L   G+   GF 
Sbjct: 413 PA-WIKLKCGQRQEFVIGGYS-APKGSRSG-FGALLLGVY---DDAGKLRYAGRVGTGFN 466

Query: 456 DAELEVLDKFVRDNTVE 472
           +  L  L   +   T++
Sbjct: 467 ETSLHALHHELTGLTID 483