Pairwise Alignments

Query, 331 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 354 a.a., ligase-associated DNA damage response exonuclease from Ralstonia sp. UNC404CL21Col

 Score =  260 bits (665), Expect = 3e-74
 Identities = 149/335 (44%), Positives = 198/335 (59%), Gaps = 13/335 (3%)

Query: 1   MLNSTPKGLYCPAGDFYIDPVRPVARALITHGHSDHARAGHGAVLATRQTLDIMRIRYGE 60
           ++ +TP GLYCPAGDFY+DP RPV RA+ITH HSDHAR GH   LA      ++R R G+
Sbjct: 7   LIVTTPSGLYCPAGDFYVDPWRPVDRAVITHAHSDHARVGHRHYLAAAPGAGVLRARLGD 66

Query: 61  DFCGSEQAVGFGETVEVNGVIVGFHPAGHVLGSAQISVEMNGLRIVASGDYKRGIDPTCA 120
           D     Q + +GE++  +GV + FHPAGHVLGSAQ+ +E  G   V SGDYK   D TC 
Sbjct: 67  DL--PLQTLPYGESIVHHGVRLSFHPAGHVLGSAQVRLEYGGDVWVVSGDYKVEADSTCT 124

Query: 121 PFETVPCDVFITEATFGLPVFHHPLPRVEIGKLLTS---IKQFPDRTHLVGAYSLGKAQR 177
           PFE V C+ FITE+TFGLP++H   P+ EI   L +         R  +V  Y+ GKAQR
Sbjct: 125 PFEPVQCNTFITESTFGLPIYHW-RPQTEIFAQLNAWWRDNADAGRASVVFCYAFGKAQR 183

Query: 178 VIRLLRDNGYADPIYIHGALARLCDYYVSQGIDLGDLRPATLEKSNPAA-FKGAIVVGPP 236
           ++  L  +    PI  HGA+ +L   Y   G+    L P  L    P A  + A+V+ PP
Sbjct: 184 ILSGLDTS--IGPIVSHGAMLQLDAAYRHAGV---ALPPTQLATDVPRADLRRALVLAPP 238

Query: 237 SAFQERWARRFNEPLIAFASGWMMVRQRAKQGGVELPLVISDHCDWPELLETITEIGPQA 296
           SA +  W RRF +   AFASGWM +R   ++ GV+  +V+SDH DWP LL+ I   G   
Sbjct: 239 SAQRTAWMRRFGDYADAFASGWMQLRGARRRRGVDRGIVLSDHADWPGLLQAIDATGATR 298

Query: 297 VWVTHGREEALVRWCELQGIAAKPLHLVGYEDEGD 331
           V+VTHG+   +VRW   +G+ A+      Y DE +
Sbjct: 299 VYVTHGQVAPMVRWLCERGLDARAF-ATEYGDEAE 332