Pairwise Alignments

Query, 603 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 498 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (256), Expect = 2e-26
 Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 4/241 (1%)

Query: 27  LETAFQPIVEATTGTIFGYESLMRGHDR-LGFSSPLALLDQAAADGELKAFEQMLASRAL 85
           L   FQP     TG     E+L+R     LG  SP   +      G +    Q +  + L
Sbjct: 257 LYLVFQPKYNLATGNCTHAEALIRWDSSVLGPVSPGEFIPLLECAGMISLLSQWVIDQVL 316

Query: 86  AKFSTLPDFSSATLFLNLDVRLIPHGDVIL-DKLVGHLARAGIPASSICFELSERFDNTS 144
            +     + S   L L +++ +    +  L ++++  L + G+ A  +  E++E    T 
Sbjct: 317 LQQVRWQE-SDIRLELAINLAIDDLSEKQLSERIITRLKQHGLSAQVLSIEITESQLMTD 375

Query: 145 VPEFTSLIARMRKEGFKLAIDDFGAGHGEMKLLCDFPLDYLKIDRHFISGIDHLPRKQHL 204
           +    +++ R+++ G K+AIDDFG GH  +  L   P+D +KIDR F++G++  PR QH+
Sbjct: 376 MVRTVAVLNRLKRAGVKVAIDDFGTGHSSLAYLKHLPVDEVKIDRAFLTGLESDPRAQHI 435

Query: 205 VRNIVNIAHVLGVRVIAEGIETEAEFLSCREFGVDLVQGWLIAKPTVFTSELPESFPHLN 264
           VR+ V++A  L   V  EG+E    F   ++ GVD VQG + AKP +   EL   +  LN
Sbjct: 436 VRSAVDLAKGLDFSVTVEGVEQMPVFKLLQQMGVDKVQGDIYAKP-MRAPELEMHWRKLN 494

Query: 265 R 265
           R
Sbjct: 495 R 495



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 449 FCYCDFDNFKPFNDKYGFNAGDHAITLFSALMRRYFFAGDCFLGHIGGDDFFI 501
           F   D   F+  ND +GF+ GD  +   +  + R     D  L  +  D+F I
Sbjct: 108 FVLIDIHRFRYVNDLFGFSLGDKLLQALAERLERRIGDKD-MLARMNEDEFLI 159