Pairwise Alignments

Query, 603 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 641 a.a., GGDEF-domain containing protein from Klebsiella michiganensis M5al

 Score =  102 bits (254), Expect = 5e-26
 Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 12/243 (4%)

Query: 12  RRFASGQMFPMAKLVLETAFQPIVEATTGTIFGYESLMRGHDRLGFSSP----LALLDQA 67
           + F    M  + K      +QPI +   G I+GYE+L+R    L  S P    + + ++ 
Sbjct: 397 KSFEDDLMQALNKGEFRVYYQPIADTLNGEIYGYEALVRWFHPLRGSVPPTEFIPVAEKI 456

Query: 68  AADGELKAFEQMLASRALAKFSTLPDFSSATLFLNLD-VRLIPHGDVILDKLVGHLARAG 126
               +L  +    A  A A +S     S   + +N+  ++LI     + D +V  L    
Sbjct: 457 GLINQLGEWVLRTACEAAASWS-----SPLKVSVNVSPIQLI--NSSLTDTVVAILRSTE 509

Query: 127 IPASSICFELSERFDNTSVPEFTSLIARMRKEGFKLAIDDFGAGHGEMKLLCDFPLDYLK 186
           +    +  E++E            +++++R+ G +++IDDFG G+  +  L  FP D +K
Sbjct: 510 LDPHRLDLEITESDVFNENTRSLEILSQLRELGVQISIDDFGTGYSSLSRLSYFPFDKIK 569

Query: 187 IDRHFISGIDHLPRKQHLVRNIVNIAHVLGVRVIAEGIETEAEFLSCREFGVDLVQGWLI 246
           IDR F+  I        +VR I+++   L +R++AEG+ETE +  S R+ G DLVQG+LI
Sbjct: 570 IDRSFVINIPDQKDDLDIVRLIISMGKSLHMRIVAEGVETEEQLQSLRKLGCDLVQGYLI 629

Query: 247 AKP 249
            KP
Sbjct: 630 GKP 632



 Score = 35.4 bits (80), Expect = 7e-06
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 453 DFDNFKPFNDKYGFNAGDHAITLFSALMRRYFFAGDCFLGHIGGDDFFIGVRDWSVEELM 512
           D DNFK  ND  G +AGD  +   ++ +  +F      L  +GGD+F +   D + E  +
Sbjct: 264 DLDNFKDVNDTQGHDAGDKLLQDLASRL-SFFRKTSETLYRLGGDEFALVSHDLNEEMAL 322

Query: 513 EILERLLSDFHDDVAGLYSDEDRAAGCMKGQDRNGNERDFALLRCS 558
           E  E +          +Y    +   C+     +G  R   L +C+
Sbjct: 323 ERAEAIREKISQPYQ-IYDTLIQIGACIGIVISDGESRTDYLYKCA 367