Pairwise Alignments

Query, 346 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  240 bits (613), Expect = 4e-68
 Identities = 133/294 (45%), Positives = 191/294 (64%), Gaps = 14/294 (4%)

Query: 3   VKVSGITKQFDRFPALNDVSLDIRSGELIALLGPSGSGKTTLLRLIAGLEQPTQGQIFFG 62
           +++SGI+K FD    + +++LD+  GE + +LGPSG GKTT+LR+IAG E   QGQI   
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 63  DEDASHRTVQERNVGFVFQHYALFRHMTVADNIAFGLKVRPSASRPPKAEIRRRVSELLD 122
           D+D +    ++R+V  VFQ YALF HMTV +N+AFGL+++    + P++EI  RV E L 
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQ----KVPQSEIEPRVMEALR 133

Query: 123 MVHLTGLEKRYPTQLSGGQRQRVALARAVAIEPKVLLLDEPFGALDAKVRKELRRWLREF 182
           MV L  + +R P QLSGGQ+QR+A+ARAV  +PKVLLLDE   ALD K+RK+++  L++ 
Sbjct: 134 MVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQL 193

Query: 183 HDRTGHTTVFVTHDQEEALELADRVVVMSQGKIEQVGTADDVYDTPNSPFVFSFIGESSS 242
             + G T +FVTHDQEEAL ++DR++VM  GKIEQ G+  ++Y+ P + FV  FIGE + 
Sbjct: 194 QRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINV 253

Query: 243 LPVTIRDG------HVLFQG-ESIGINEGGTGEG---ELFFRPEDVVLTDEKDA 286
              T  D        V  +G ESI   E     G   ++  RPED+ + + K++
Sbjct: 254 FQATTIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKES 307