Pairwise Alignments

Query, 290 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  110 bits (274), Expect = 4e-29
 Identities = 65/246 (26%), Positives = 131/246 (53%), Gaps = 3/246 (1%)

Query: 28  IAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAISVPLNVV 87
           +++   FL  FL+   +S      +   D    +I  P+ + +++++L  + IS  + + 
Sbjct: 9   MSIFLTFLFTFLLFLSISSLILVPK--FDDVLSSIFNPEMIYSLKVSLYSSLISTGIVLG 66

Query: 88  FGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIEI 147
           F +   +AI+++ F GK+ +  ++DLP +   ++ GL  ++LF   + +G  L+ +GI++
Sbjct: 67  FSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFG-QTFIGDILEFFGIKV 125

Query: 148 LFAVPGIVLATIFVTFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNIKWG 207
           +F   GIV+A IF   P+  R +    QD     E  + SLG S ++TF  VTLP  + G
Sbjct: 126 VFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSG 185

Query: 208 LLYGVLLCNARAMGEFGAVSVVSGHIRGETNTMPLHVEILYNEYNIGASFAVATLLAGLA 267
           +    ++  AR MG FG V +++G     T T+P+ + +  +  N+G + +   +L  ++
Sbjct: 186 IFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLMIS 245

Query: 268 LVTLVL 273
            + +++
Sbjct: 246 FIAILI 251