Pairwise Alignments

Query, 290 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  127 bits (318), Expect = 3e-34
 Identities = 76/256 (29%), Positives = 149/256 (58%), Gaps = 9/256 (3%)

Query: 25  LALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAISVPL 84
           L  ++V  LF+   ++  + ++ FE       +F+D++   +   AI+L+L  A+I+  L
Sbjct: 12  LFALSVFILFILMIVMSIVTNISFE-------TFYDSLFSKEIQFAIKLSLETASIATIL 64

Query: 85  NVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYG 144
             + GV AA+A+A++ FKGK  + ++++LP  + P+I+G   ++ F  ++V G ++    
Sbjct: 65  GTLLGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFF-GNTVFGKFITENI 123

Query: 145 IEILFAVPGIVLATIFVTFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNI 204
           IEILF   G ++A  FV  PF+ R    + +      E  A SLG+  +++F  V +P  
Sbjct: 124 IEILFTYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMA 183

Query: 205 KWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTMPLHVEILYNEYNIGASFAVATLLA 264
           K G++ G +L  AR++GEFGA  +++G  + +T T+P+ V +  +  ++  + AV+ +  
Sbjct: 184 KNGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFL 243

Query: 265 GLA-LVTLVLKTILEI 279
            +A LV ++++++L+I
Sbjct: 244 LVATLVLVIIRSVLKI 259