Pairwise Alignments

Query, 290 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  108 bits (270), Expect = 1e-28
 Identities = 59/213 (27%), Positives = 119/213 (55%), Gaps = 1/213 (0%)

Query: 61  AIVEPDALSAIRLTLLVAAISVPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPV 120
           +I  P+ + +++++L  + IS  + + F +   +AI+++ F GK+ +  ++DLP +   +
Sbjct: 40  SIFNPEMIYSLKVSLYSSLISTGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPEL 99

Query: 121 ISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIFVTFPFVARELIPLMQDQGNG 180
           + GL  ++LF   + +G  L+ +GI+++F   GIV+A IF   P+  R +    QD    
Sbjct: 100 VLGLALLLLFG-QTFIGDILEFFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPR 158

Query: 181 DEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTM 240
            E  + SLG S ++TF  VTLP  + G+    ++  AR MG FG V +++G     T T+
Sbjct: 159 YELVSRSLGYSEFETFKNVTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETL 218

Query: 241 PLHVEILYNEYNIGASFAVATLLAGLALVTLVL 273
           P+ + +  +  N+G + +   +L  ++ + +++
Sbjct: 219 PITLYLNMSYGNLGMAISSGIVLLMISFIAILI 251