Pairwise Alignments

Query, 285 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  135 bits (339), Expect = 1e-36
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 5/243 (2%)

Query: 29  VTYLFLIIL-IPLGGLVWSTAKLGFADFIAIATDSRTLNALRVSFGTAFIAALVNAVFGV 87
           +T+LF  +L + +  L+       F D ++   +   + +L+VS  ++ I+  +   F +
Sbjct: 13  LTFLFTFLLFLSISSLILVPK---FDDVLSSIFNPEMIYSLKVSLYSSLISTGIVLGFSI 69

Query: 88  IVAWVLTRYRFPGRRFVDAIVDLPFALPTAVAGIALTTLYANRGWVGSLFEPFGIKIAFT 147
              + ++RY FPG+  V AI+DLP A P  V G+AL  L+    ++G + E FGIK+ FT
Sbjct: 70  PTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQT-FIGDILEFFGIKVVFT 128

Query: 148 PTGIVIALIFIGLPFVVRTVQPVMEEIDRQVEEVAATLGANRFQTITRVLLPSLTPAILT 207
             GIV+A IF  LP+ +R V    ++I+ + E V+ +LG + F+T   V LP     I  
Sbjct: 129 KLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSGIFA 188

Query: 208 GFALAFARGVGEYGSVIFIAGNIPYVSEIAPLLIVIRLEEFNYAAATGIATIMLIISFAM 267
              +AFAR +G +G+V+ +AG     +E  P+ + + +   N   A     ++L+ISF  
Sbjct: 189 SSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLMISFIA 248

Query: 268 LFL 270
           + +
Sbjct: 249 ILI 251