Pairwise Alignments

Query, 1155 a.a., chromosome segregation protein from Agrobacterium fabrum C58

Subject, 1145 a.a., SMC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  455 bits (1171), Expect = e-132
 Identities = 368/1191 (30%), Positives = 581/1191 (48%), Gaps = 83/1191 (6%)

Query: 1    MKFNKLRVVGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60
            M+  ++++ GFKSFV+P++      L+ ++GPNGCGKSN+++A+RWV+GE+S K++R   
Sbjct: 1    MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60

Query: 61   MDDVIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDADEIQVTRRIERENGSVYRINGK 120
            M DVIF+GS  R   + A V L  +N +      +   +EI V R++ R+  S Y +NG+
Sbjct: 61   MSDVIFNGSSARKPVSVAGVELVFENKEGRLAGQYASYEEISVKRQVSRDGESWYFLNGQ 120

Query: 121  EARAKDVQLLFADASTGARSPSMVGQGRIGELINAKPQARRQLLEEAAGISGLHSRRHEA 180
            + R KD+  LF     G RS +++ QG I  LI +KPQ  R  +EEAAGIS    RR E 
Sbjct: 121  KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRRET 180

Query: 181  ELRLRAAETNLERLEDVTAQLESQIESLKRQARQANRFKMLSADIRAREATLLHIRWVEA 240
            E R+R    NLERL D+ ++L  Q++ L +QA+ A +++ L    R   A LL +R+   
Sbjct: 181  ESRIRHTRENLERLGDIRSELGKQLDKLSQQAKAATQYRELKQAERKTHAELLVMRF--- 237

Query: 241  KEAEGEAESALNQATNIVAEKAQGQMEAAKQQGIAS---LKLPELREDEARVAAALQRLQ 297
            +E + +  S   Q  ++  ++A  Q  A   +  ++   +KL +L E E     A     
Sbjct: 238  QELQSQMASLSEQINSLELQQAAAQSLAQTSELESTELQVKLSQLAEQEQHAVEAYYLTG 297

Query: 298  IARTQLDDEANRLLRRRDELARRLSQLGEDIVREERLVADNAQILARLDEEEAELLDILS 357
                +L+ +     +R  +L  +L QL E + + +  +         L+ E  +L     
Sbjct: 298  TEIAKLEQQLQSQKQRDAQLHTQLEQLSEQLTQNKAKLDTYQASFHALEAELGQLAPQHE 357

Query: 358  DSGRHADEMREAFEAAAVKLAESEAVFTSITAERAEAAAGRQ---QLERAI----RDLSD 410
                  DE++  +E   + ++ SEA  T +   +A A A  +   +L R+     + L+ 
Sbjct: 358  LQQEMMDELQAQWE---MSVSRSEAQ-TEVARTQASAVAQHKLQLELHRSKLVHQQQLNA 413

Query: 411  RKLRLERQSQEASAEIDTIDEKLSGLPDP-AERREAVEAAEIAVEDALIVAEEAEAAVAE 469
             K +L ++ Q+   E+ ++ E    L D  A   + +E  E  +   + V +E E A+ E
Sbjct: 414  HKTQLHQEQQQ---ELSSLTEH--ALEDTSASLSQEIELLEQVITQQIEVNQELELALVE 468

Query: 470  ARSAEALARGPLETAKNRLNALDTEARTITKMLATSAAANGSFTPVAEEMTVERGYEAAL 529
               A  LARG  E    RL ++      + + LA     +     + + + VE G+EAA 
Sbjct: 469  NTQALDLARGEFEQLSQRLTSMRARFELVEQWLAKQEELSDK-PQLWQSIQVENGWEAAA 527

Query: 530  GAALGDDLESPLDASAPAYWGGNG----NGADDPGLPQGAKPLLDYAQAPDALRRALAQI 585
              AL   +  P+  SA               DD       K   D   AP      L  +
Sbjct: 528  ELALQGLMTLPVGVSANELGFYTDARCLEKIDDHIEGSPIKLPADVNLAP-----WLNGL 582

Query: 586  GVVADVSEARRLLPSLKAGQRLVTREGALFRWDGHIASADAPGAAALRLSQKNRLAEIEA 645
                +++ A+  L SL A +R+VT +G L      IA  D   +      ++ +L+E  A
Sbjct: 583  KWADNLASAQAQLASLAADERIVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIA 642

Query: 646  ELDEARSI----LEEAEDQLAAKTEDIRSSELRLSEVRDRSRLATRQLAEAREALTSAER 701
            E  +AR+I    L+E   QL    + +     RL +++      + QL  A       E 
Sbjct: 643  ECVQARAIQQSKLDELSQQLIQVRDSVNQGTQRLHQLQLDKATKSTQLNNAEALAKQREA 702

Query: 702  ASGDLLRRRDVVSEAQNQIG---AQIDEIAVQEENARIEMEDAPDLSVLDLRLRESQLEV 758
              G L    D V+    ++     Q+  +A QE+    E+ DA   S+ D + ++SQ   
Sbjct: 703  KRGQL---EDTVARTHAELAELAGQLMLLAEQED----ELADALAQSI-DKQQQQSQ--- 751

Query: 759  ATDRGLLAEARARHEGVSREAESRQRRIQAIGQERSTWASRAASAADHIATLREREEE-- 816
               +G LA    RH+ +  +    QRR+  +     +  +R A + + I   R R  E  
Sbjct: 752  -DAQGDLA----RHQALKAQISDTQRRLSTLNASLQSVTTRMAVSTEQIELQRVRVNELV 806

Query: 817  -ARE-------EIAEL--DIAPEEFDEKRRNLLNELQKTEDARRAAADR---LAEAENLQ 863
             +RE        +AEL  D    +  E+   LLN+ Q  + A +A   +   L E  N  
Sbjct: 807  QSRETLSAQLASVAELHGDQQTAKLSEQLALLLNQQQSQQQALKALRTQQSSLTETLNSI 866

Query: 864  RAADRVAATALSELAEAREKRGRAEERLVSAREKRLETEHRIRETLNTEPHMAFRLTGLG 923
                +     L  L ++        E L    + +L         L+ +  +  ++    
Sbjct: 867  GLKQKQELGKLEGLTQSLSTLKLRREGLKGQADSQLAA-------LSEQQIVLAQIIDSL 919

Query: 924  PDQPKPDIRDVERDLDRLKIERERLGAVNLRAEEEQAELSGKLEALIKERDDIIDAVRKL 983
            P   +PD    +RDLD+++ +  RLGA+NL A EE  + S +   L  + +D+   +  L
Sbjct: 920  PSDGQPD--KWQRDLDQIRQKIIRLGAINLAAIEEFEQQSERKSYLDHQDEDLNKGLATL 977

Query: 984  RAGIQSLNREGRERLIAAFDVVNSQFQRLFTHLFGGGTAELQLIESDDPLEAGLEILARP 1043
               I+ +++E R R  A FD VN    RLF  +FGGG A L L E DD LE G+ I+A+P
Sbjct: 978  EEAIRKIDKETRTRFKATFDAVNEDLGRLFPKVFGGGRAYLALTE-DDLLETGVTIMAQP 1036

Query: 1044 PGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVLDEVDAPLDDHNVERYCNLMDEM 1103
            PGKK  T+ LLSGGE+ALTA++L+FA+F  NPAP C+LDEVDAPLDD NVER+C L+ EM
Sbjct: 1037 PGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVERFCRLLKEM 1096

Query: 1104 VASTETRFVIITHNPITMARMNRLFGVTMAEQGVSQLVSVDLQTAEQLREA 1154
              S   +F+ I+HN ITM   ++L GVTM E GVS++V+VDL+ A  + +A
Sbjct: 1097 --SQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDLEQAVAMADA 1145