Pairwise Alignments

Query, 146 a.a., ribonuclease H from Agrobacterium fabrum C58

Subject, 201 a.a., ribonuclease H family protein from Methanococcus maripaludis S2

 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 7   FTDGACSGNPGPGGWGAVLRYGETEKELSGGEADTTNNRM-----ELLAAISALNALKSP 61
           + DG+ +      G GA++ +   EKE+     DT  ++M     E+LA+  A+    S 
Sbjct: 71  WVDGSFNLKNKEYGAGALILFNGIEKEIKAKGNDTELSKMRNVAGEILASELAMEYAVSK 130

Query: 62  CEVDLYTDSAYVKDGITKWIFGWKKKGWKTADNKPVKNVELWQALEAAQERHKVTLHWVK 121
              +L     Y+  GI KW  G     WKT  +  ++ +E     +      K+ + +VK
Sbjct: 131 NVKNLVIYHDYI--GIEKWCTG----EWKTNKSGTIEYIE-----KCINYLKKLNIEFVK 179

Query: 122 --GHAGHPENERADELARKGM 140
              H+G   NE AD+LA++ +
Sbjct: 180 VKAHSGDKNNEIADKLAKESL 200