Pairwise Alignments

Query, 291 a.a., cytochrome c oxidase subunit III from Agrobacterium fabrum C58

Subject, 295 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (519), Expect = 2e-57
 Identities = 115/296 (38%), Positives = 157/296 (53%), Gaps = 33/296 (11%)

Query: 11  YHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIVLYVM 70
           Y++   S WP++A++G F+  +G   +   L        G     P +F++G +++ Y++
Sbjct: 7   YYVPAQSKWPIIATVGMFVTVYGLATWFNDLKAARPDSHG-----PLIFFVGGLLLAYML 61

Query: 71  YAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQAS 130
           + W+   IKE+  G ++  +    R+GM  FI SEVMFF+A+F A F   +     +   
Sbjct: 62  FGWFGAVIKESRAGLYSAQLDRSFRWGMSWFIFSEVMFFIAFFGALFYVRMISAPGLAG- 120

Query: 131 RLEYTGG-----------QWP----------PKGIEVIDPWHLPLYNTVILLLSGTCVTW 169
             E T G            WP          P   +VI PW LPL NTV+L+ S   VT 
Sbjct: 121 --EGTKGLSHMLWPSFEFAWPLLNNPDPKLFPAPKDVISPWGLPLLNTVLLVSSSVTVTI 178

Query: 170 AHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHA----PFDFKNSIYGATFFMATG 225
           AHHAL    R  L   LA+TV LG  F   Q  EYIHA         + +YGATFFM TG
Sbjct: 179 AHHALKKGHRGALKLWLAITVLLGCAFLGFQAEEYIHAYKELGLTLGSGVYGATFFMLTG 238

Query: 226 FHGFHVFVGTVFLLVCLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYI 281
           FHG HV +GT+ L V L R + G F  +  FGFEAA+WYWHFVDVVW+ LF  +Y+
Sbjct: 239 FHGAHVTIGTIILFVMLMRIMRGHFDNEHQFGFEAASWYWHFVDVVWIGLFVFVYV 294