Pairwise Alignments

Query, 291 a.a., cytochrome c oxidase subunit III from Agrobacterium fabrum C58

Subject, 291 a.a., cytochrome c oxidase subunit III (RefSeq) from Shewanella amazonensis SB2B

 Score =  181 bits (459), Expect = 2e-50
 Identities = 103/295 (34%), Positives = 158/295 (53%), Gaps = 28/295 (9%)

Query: 7   KNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYL-SGGSFKLFGAELANPWLFYIGLVI 65
           K+ +Y++   S WP++ +IG F++ +G   ++  L SGGS+          ++   G+ +
Sbjct: 4   KHQNYYVPSQSGWPIIGAIGLFLIAYGAGNFVHQLKSGGSW--------GGYILLAGVAV 55

Query: 66  VLYVMYAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDA------ 119
           +L+++  W+ + + E+  G ++  +    R GM  FI SEVMFF A+F A   A      
Sbjct: 56  ILFMLVGWFRNVVDESMSGLYSSQMDRSFRQGMSWFIFSEVMFFAAFFGALLYARTIAVP 115

Query: 120 -------SLFPHEAIQASRLEYTGGQWPPKGI--EVIDPWHLPLYNTVILLLSGTCVTWA 170
                  +   HE +  +       +  P G   + +    LPL NT++LL S   + +A
Sbjct: 116 WLGGASNNAMTHEVLWPAFEAVWPLETTPDGTKTQAMGWTGLPLINTILLLTSSFTLHFA 175

Query: 171 HHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHAPFDF----KNSIYGATFFMATGF 226
           H  L    R  L   L LT+ LG+ F ++QV EYIHA  +      + +YG TFF+ TGF
Sbjct: 176 HMGLEKGKRTALTLWLGLTILLGLGFLSLQVEEYIHAYTEMGLTLASGVYGNTFFLLTGF 235

Query: 227 HGFHVFVGTVFLLVCLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYI 281
           HG HV +GT+FLLV  FR + G F+    F F+A +WYWHFVDVVWL LF  +Y+
Sbjct: 236 HGLHVTLGTIFLLVLFFRVLKGHFSHDNQFAFQAGSWYWHFVDVVWLCLFVFVYV 290