Pairwise Alignments

Query, 291 a.a., cytochrome c oxidase subunit III from Agrobacterium fabrum C58

Subject, 291 a.a., cytochrome c oxidase, subunit III (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (475), Expect = 2e-52
 Identities = 104/298 (34%), Positives = 156/298 (52%), Gaps = 34/298 (11%)

Query: 7   KNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIV 66
           K+  Y++   S WP++ + G F++ +G   Y++ L          + +  ++   G+ ++
Sbjct: 4   KHEHYYVPAQSAWPIIGAFGLFLIAYGAGSYVQQLQT-------EQTSGGYILTAGIAVI 56

Query: 67  LYVMYAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDA------- 119
           LY+++ W+   I E+  G +++ +    R GM  FI SEVMFF A+F A   A       
Sbjct: 57  LYMVFGWFRTVIGESMSGLYSKQMDRSFRQGMSWFIFSEVMFFAAFFGALLYARTIAVPW 116

Query: 120 ------SLFPHEAIQASRLEYTGGQWP----PKGI--EVIDPWHLPLYNTVILLLSGTCV 167
                 +   HE +  +        WP    P G   E +    LPLYNT+ILL S   +
Sbjct: 117 LGGASNNAMTHEVLWPN----FQAVWPLVTTPDGTKTEAMGWTGLPLYNTIILLTSSVTL 172

Query: 168 TWAHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHA----PFDFKNSIYGATFFMA 223
            +AH +L  + R  L   L +T+ LG+ F  +Q  EY HA         + +YG TFF+ 
Sbjct: 173 HFAHVSLEKSKRTALTLWLGITILLGLAFLFLQAKEYAHAYQEMGLTLSSGVYGNTFFLL 232

Query: 224 TGFHGFHVFVGTVFLLVCLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYI 281
           TGFHG HV +GT+FL V   R + G FTP +HF F+A +WYWHFVDVVWL LF  +Y+
Sbjct: 233 TGFHGMHVTLGTIFLFVLFLRVLRGHFTPDKHFAFQAGSWYWHFVDVVWLCLFVFVYV 290