Pairwise Alignments

Query, 371 a.a., molecular chaperone, DnaJ family from Agrobacterium fabrum C58

Subject, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 231 DEREIRFQLEAGMADGHIVRLKGQGLKLPNLARG---DLAVTLLAARDDAFSLRGFDIHT 287
           D   +   + AG  DG  +RL+G+G   P +A G   D  + +       F   G DI  
Sbjct: 154 DGNTLDLAIPAGTRDGSTLRLRGKGT--PGIAGGEPGDALIEISVRSHSVFRREGNDIEI 211

Query: 288 TLPISLSDAVLGCEAKVATPLGEENITIPAWSGSDRVLRLAGKGLADGKGGSGDLVIELR 347
            LPI+L +AVLG + +V T  G  ++TIP  S +  +LRL GKG+    G +GD  + L+
Sbjct: 212 DLPITLYEAVLGAKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTLK 271

Query: 348 IVLLEKPDEKVTDLMRHM 365
           +VL   P     DL R M
Sbjct: 272 VVL---PTATDPDLERFM 286



 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 11/273 (4%)

Query: 3   DPYSILGVKRDARHEDIKAAWRTKAKTVHPDANRDDPDASARFAEIGQAYDLLKDSKKRD 62
           DPY ILGV R  + ++I+ A+R +AK +HPD +  D +   +F  +  AY LL D ++R 
Sbjct: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63

Query: 63  LYDQARQAAEKKKRGETIMQQREAAREAAERAKAAEKL--MEELAR--ADARNRAQTGQK 118
            +D+    A   +R +    +  A  + A R  +A      E+++   AD   +   G +
Sbjct: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTGEFEDVSDIFADLFGQGGAGGR 123

Query: 119 TDAKPETAEDIVERIFGADAQNDPKVQQAAEAAKAAASAAKGDIPAAGDTAQSAAGDDRT 178
             A+ +     +E  F  DA N  + +           A    IPA      +     + 
Sbjct: 124 FKARGQDRHYHLELEF-LDAVNGARRRITFPDGNTLDLA----IPAGTRDGSTLRLRGKG 178

Query: 179 APASLAVNLFNALVR-RFRPAQPAAEKVPDITAEATVTVADLLEHKWVTLQLADEREIRF 237
            P        +AL+    R       +  DI  +  +T+ + +    + +     R +  
Sbjct: 179 TPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLGAKIEVPTISGR-VSM 237

Query: 238 QLEAGMADGHIVRLKGQGLKLPNLARGDLAVTL 270
            +  G   G I+RL+G+G+K  +   GD  VTL
Sbjct: 238 TIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTL 270



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 278 FSLRGFDIHTTLPISLSDAVLGCEAKVATPLGEE-NITIPAWSGSDRVLRLAGKGLADGK 336
           F  RG D H  L +   DAV G   ++  P G   ++ IPA +     LRL GKG     
Sbjct: 124 FKARGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGSTLRLRGKGTPGIA 183

Query: 337 GGS-GDLVIELRI 348
           GG  GD +IE+ +
Sbjct: 184 GGEPGDALIEISV 196