Pairwise Alignments

Query, 365 a.a., chorismate synthase from Agrobacterium fabrum C58

Subject, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

 Score =  277 bits (709), Expect = 3e-79
 Identities = 152/367 (41%), Positives = 226/367 (61%), Gaps = 26/367 (7%)

Query: 4   NSFGHLFRVTTWGESHGPSLGCVVDGCPPGIRFTLAEVQHWMDKRKPGQSRFVTQRREDD 63
           N+FG  FRVTTWGESHG +LG V+DGCP  +     ++Q+ +++R+PG S F T R+E+D
Sbjct: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYSIFSTPRKEED 61

Query: 64  IVKVLSGVMLDEDGETMTTTGTPISMLIENTDQRSKDYGEIARRFRPGHADFTYDLKYGI 123
           ++++LSG+    +G+T   TGTPIS L+ N  Q+SKDY +I    RPGHAD  Y LKYG 
Sbjct: 62  MLEILSGIF---EGKT---TGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGN 115

Query: 124 RDYRGGGRSSARETAARVAAGAIARKVVP---SLNVRGALVQIGKHKINRDNWD------ 174
            DYRGGGRSS R T   V  GA+A+K++    ++ + G   +IGK   + D +       
Sbjct: 116 YDYRGGGRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKINGDFDYYKNPEFFE 175

Query: 175 --------WDQVDQNPFFCPDPEMVPVWEEYLDGIRKSGSSIGAVVEVVAEGVPAGIGAP 226
                   +++ + NP  CP      + +  LD + K   S+G ++E++ +G+P G+G P
Sbjct: 176 SDSNIEKLFEKTENNPLRCPSKNSDEMKDYVLDAMDKK-DSVGGIIEIIIKGIPQGVGNP 234

Query: 227 IYAKLDQDIASSLMSINAVKGVEIGEGFASAELSGEENADQMRMGNDGKPIFLSNHAGGI 286
           ++ KL+  + S+ + INAVKG EIG GF S++L G E  D+  + ++      +N+AGGI
Sbjct: 235 VFNKLEGKLGSAFIGINAVKGFEIGRGFESSDLYGSEMNDEYYI-DENSINEKTNNAGGI 293

Query: 287 LGGIATGEPVIARFAIKPTSSILTERLSIDTDGN-NVDVRTKGRHDPCVGIRAVPIGEAM 345
           +GGI+TG PV+ R +IKPT SI   + S++   N N  +   GRHDP +  R +P+ E+M
Sbjct: 294 IGGISTGSPVVLRVSIKPTPSISKIQDSVNLISNENEKIEIGGRHDPIIVPRVIPVLESM 353

Query: 346 IACTVAD 352
            A TVAD
Sbjct: 354 AAITVAD 360