Pairwise Alignments

Query, 639 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Agrobacterium fabrum C58

Subject, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  599 bits (1545), Expect = e-175
 Identities = 318/629 (50%), Positives = 428/629 (68%), Gaps = 17/629 (2%)

Query: 8   PLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVFN 67
           P L   N P +L+ +    LP+L  ELR  ++++VS++ GHL +GLG VELT+A+H V++
Sbjct: 9   PTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYH 68

Query: 68  TPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSIS 127
           TP D LI+DVGHQ YPHKILTGRRD++ T+RQ+DGL  F  R ESEYD    GHSSTSIS
Sbjct: 69  TPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128

Query: 128 AGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPP 187
           A LGMA+ AG +G DRKV++VIGDG+++AGMAFEA+N+AG +   ++V+LNDN+MSI+  
Sbjct: 129 AALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDNEMSISEN 188

Query: 188 TGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELG 247
            GA++ +LA++ SG  Y   R+ GKK+ + +   I   + R   H +G V  GTLFEELG
Sbjct: 189 VGALNNHLAQVLSGSLYTSIREGGKKVLSGI-PPIKELVRRTEEHLKGMVVPGTLFEELG 247

Query: 248 FYHIGPIDGHSFDHLLPVLRNVRDNQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDV 307
           F +IGP+DGH    L+  L+N+R+  KGP  +HV+T+KGKGYAPAE     YHGV KFD 
Sbjct: 248 FNYIGPVDGHDVLELIKTLKNMRE-LKGPQFLHVMTKKGKGYAPAEKDPIGYHGVPKFDP 306

Query: 308 ITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPSRTFDV 367
              +  K+    P+++ +F + L   A  D K++ +T AM  G+G+ + ++ +PS+ FDV
Sbjct: 307 SHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPSQYFDV 366

Query: 368 GIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGA 427
            IAEQHAVT A G+A  GY P  A+YSTFLQRGYDQL+HDVAI +LPV F IDRAG VGA
Sbjct: 367 AIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAGIVGA 426

Query: 428 DGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEM 487
           DG TH G+FD +++  +P M++MA ADE E + M+ T   + +GP + RYPRG G+GVE+
Sbjct: 427 DGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQH-QGPSAVRYPRGNGMGVEL 485

Query: 488 PARGEILQIGKGRIIK-----EGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFA 542
            +    L+IGKGR+++     EG KVA+LSFGT L   L AAE L+A     TVAD RF 
Sbjct: 486 ESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA-----TVADMRFV 540

Query: 543 KPLDLDLIRQLAAHHEVLVTIEEGSV-GGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWV 601
           KPLD  LI+QLA  H+VLVT+EE ++ GG GA V+ F+     L     V  L LPDQ++
Sbjct: 541 KPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQL---KPVLNLGLPDQFI 597

Query: 602 EQAKPETMYANAGLDRAGIVSTVFNALGQ 630
            Q   E M+A  GLD AGI   + + L +
Sbjct: 598 VQGTQEEMHAELGLDGAGIERAIRDYLAK 626