Pairwise Alignments

Query, 673 a.a., chemotaxis methyl-accepting protein from Agrobacterium fabrum C58

Subject, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  229 bits (584), Expect = 3e-64
 Identities = 137/330 (41%), Positives = 202/330 (61%), Gaps = 8/330 (2%)

Query: 305 LAALADGDLSYRIETPFVPAIDPVRVNFNSAVEKLQQALRTVGENAAAINAGASEMLSAA 364
           ++ +A+GDL+  +   +      +    N+++  L+  +  +  ++A +   ++E+    
Sbjct: 339 MSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGN 398

Query: 365 DDLSRRTEQQAASIEETAAALEEVTTTVRDSARGAEDAGNLVQRARAGAEKSGVVVRKAV 424
           +DLS+R E QA+++EETAA++EE+T TVR +A  A+DA  L   A   A + G VV +A+
Sbjct: 399 NDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEAI 458

Query: 425 AAMREIEKSSGEIGNIIGVIDDIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQ 484
           +AM  I  +S +I +II VID+IAFQTNLLALNA VEAARAG+ G+GFAVVA EVR LAQ
Sbjct: 459 SAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQ 518

Query: 485 RSANAAKEIKTLIGASSQQVENGVNLVDETGKALELIVSEVEEINAHVSAIVVAAREQAT 544
           RSA AAKEIK LI  S  +V  G  LV+E+G  L+ IV  V  ++  ++ I  ++ EQ+T
Sbjct: 519 RSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQST 578

Query: 545 GLQEINTAVNTMDQGTQQNAAMVEQQTAASHSLAREAEALNSLLGQFRMGGTRAAVAGAG 604
           G+ EIN A+  MD+ TQQNA++VE+ +AAS SL  E + L +L+  F             
Sbjct: 579 GIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTFE--- 635

Query: 605 GYSAPRQSSAKPAFQPAPAAPVRKAPVKSA 634
               PRQS+     +  P   + KAP+  A
Sbjct: 636 --RKPRQSTPP---KTKPVVSMHKAPINQA 660