Pairwise Alignments

Query, 673 a.a., chemotaxis methyl-accepting protein from Agrobacterium fabrum C58

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  245 bits (625), Expect = 5e-69
 Identities = 148/374 (39%), Positives = 220/374 (58%), Gaps = 19/374 (5%)

Query: 300 ELGKGLAALADGDLSYRIETPFVPAIDPVRVNFNSAVEKLQQALRTVGENAAAINAGASE 359
           E+ + + AL+ GDLS ++  PF      +    +  +  L+Q +  +   AA I   A+E
Sbjct: 305 EVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATE 364

Query: 360 MLSAADDLSRRTEQQAASIEETAAALEEVTTTVRDSARGAEDAGNLVQRARAGAEKSGVV 419
           + +   DLS RTEQQA+++E+TA+++EE+ +TVR ++  A  A  L  +A   A   G +
Sbjct: 365 ISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGEL 424

Query: 420 VRKAVAAMREIEKSSGEIGNIIGVIDDIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEV 479
           + + V  M  I +S+ +I +IIGVID IAFQTN+LALNA VEAARAG+ G+GF+VVA EV
Sbjct: 425 IEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEV 484

Query: 480 RELAQRSANAAKEIKTLIGASSQQVENGVNLVDETGKALELIVSEVEEINAHVSAIVVAA 539
           R LAQRSANAAK+IK LI  S  ++ NG  LVD +G  ++ IV  ++ ++  ++ I  A+
Sbjct: 485 RSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASAS 544

Query: 540 REQATGLQEINTAVNTMDQGTQQNAAMVEQQTAASHSLAREAEALNSLLGQFRMGGTRAA 599
            EQATG+ E+N AVN MD+ TQQNAA+VE+  AAS SL  +AE L   +  FR+      
Sbjct: 545 AEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRL------ 598

Query: 600 VAGAGGYSAPRQSSAKPAFQPAPAAPVRKAPVKSASAAARPVASPARALGQSLARAFGGA 659
                    P Q ++ P+   A     + APV +   A+    +PA+   ++ +RA    
Sbjct: 599 ---------PDQDTSAPSLLKAVNKRPQSAPV-TRHPASHIAKTPAKITAKASSRA---Q 645

Query: 660 AEAPAAKDQDWTEF 673
                A D++W  F
Sbjct: 646 PVMQVAHDEEWESF 659