Pairwise Alignments

Query, 416 a.a., RNA methyltransferase from Agrobacterium fabrum C58

Subject, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 18/182 (9%)

Query: 251 FTQATKQAEDAMAELMLAHVGKSKR-IADLFCGSGTFALRLAR-IGRVHAVEAEDKALKA 308
           FTQ   +  + M E  +    +SK  + +L+CG+G F+L LA+   RV A E    +++A
Sbjct: 188 FTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEA 247

Query: 309 LDF--AAR---NTQGLKPVSVE-------KRDLFRRPLMTSELKNY--DAVVFDPPRAGA 354
             F  AA    N Q ++  + E       KR+  R      +L++Y  + +  DPPR+G 
Sbjct: 248 AQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGM 307

Query: 355 EVQCKELARSTVKKIVAVSCNPLTLARDLAILTEGGYRVTRVTPVDQFLWSPHVEAVAVL 414
           ++   ++ +   ++I+ +SCNP TL  +L +L E  ++V R    DQF ++ H+EA  +L
Sbjct: 308 DIDTCKMVQG-YERILYISCNPETLQENLQVLGE-THQVVRFALFDQFPYTHHMEAGVML 365

Query: 415 EK 416
           E+
Sbjct: 366 ER 367