Pairwise Alignments

Query, 416 a.a., RNA methyltransferase from Agrobacterium fabrum C58

Subject, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 7e-38
 Identities = 137/443 (30%), Positives = 194/443 (43%), Gaps = 52/443 (11%)

Query: 8   IKSLGAQGDGIAHCPDGPVYVPFALPGETVAIAKVKDQ-----GTVMSITEASADRRDPV 62
           I+SL     G+       V+V  ALPGETV  A  +++     G V ++   S  R  P 
Sbjct: 6   IESLDHDARGVTRLEGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCARVPPR 65

Query: 63  CRHFGPEGINGTCGGCSLQHLADQPYHAFKRELVVSAL-RSKGLTPPVDDLVICRP--GE 119
           C HFG      TCGGCS+QHL      A K+ L+ + L     L P      I  P  G 
Sbjct: 66  CPHFG------TCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGY 119

Query: 120 RRRAVFAARKTE-KGLLLGFSQANSHHIVAIEECPVTSPGIVSRFDAIRA--IGLSMVAN 176
           R RA    R  E KG+L+GF +  S ++  +  CP+    +      +R   + LS+   
Sbjct: 120 RHRARLTVRMVESKGMLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRLSIRDR 179

Query: 177 AEPFRITVLETLSGLDISV-EGIKSVNDKQRRTLTETVLAMRGIARVSLSGEILIEPQKP 235
                I V E  + + + + E +   ++K  R   +      GI          ++P+ P
Sbjct: 180 LPQVEIAVGEKCTVMVLRILEPLSGADEKLLRAFADE----HGIV-------FFLQPKGP 228

Query: 236 IIEFGGIPVSPP----------------AGGFTQATKQAEDAMAE--LMLAHVGKSKRIA 277
              +   PV  P                   FTQ        +    + L      +RIA
Sbjct: 229 ASAYRFHPVDGPDLSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIA 288

Query: 278 DLFCGSGTFALRLARIG-RVHAVEA-EDKALKALDFAARNTQGLKPVSVEKRDLFR-RPL 334
           DLFCG G F L +AR G RV  VE  ++   +A + AA N      VS    +LF   P 
Sbjct: 289 DLFCGLGNFTLPIARSGARVVGVEGLKELTRRAEENAAANGLAAN-VSFGVANLFECTPK 347

Query: 335 MTSELKNYDAVVFDPPRAGAEVQCKELARSTVKKIVAVSCNPLTLARDLAILT-EGGYRV 393
               L ++D ++ DPPR GA    K L   +  +IV VSCNP TLARD AIL  + GYR 
Sbjct: 348 SLGALGHFDKMLIDPPREGAVEVVKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRF 407

Query: 394 TRVTPVDQFLWSPHVEAVAVLEK 416
           +    V+ F  + HVE++A+ EK
Sbjct: 408 SGAGIVNMFPHTSHVESIALFEK 430