Pairwise Alignments

Query, 416 a.a., RNA methyltransferase from Agrobacterium fabrum C58

Subject, 476 a.a., 23S rRNA m(5)U-1939 methyltransferase from Paraburkholderia bryophila 376MFSha3.1

 Score =  108 bits (271), Expect = 3e-28
 Identities = 121/447 (27%), Positives = 190/447 (42%), Gaps = 59/447 (13%)

Query: 13  AQGDGIAHCPDGP----VYVPFALPGETVAIAKVK-----DQGTVMSITEASADRRDPVC 63
           A+G G     DG     V+V  ALPGE V+ +  +     +Q  V+ +   S  R  P C
Sbjct: 45  ARGVGRMESEDGTPGKVVFVEGALPGERVSYSTHRSKPKFEQAEVVQVFRESVMRTKPKC 104

Query: 64  RHFGPEGINGTCGGCSLQHLADQPYHAFKRELVVSALRSKGLTPPVDDLVICRP------ 117
            +F        CGGCS+QHL  +   A K+ ++   L+      P     + RP      
Sbjct: 105 VYFD------ICGGCSMQHLDIRAQVAVKQRVLEDNLQHLAKLRPE---TVFRPIHGPAW 155

Query: 118 GERRRAVFAAR--KTEKGLLLGFSQANSHHIVAIEECPVTSPGIVSRFDAIRAI--GLSM 173
           G R RA  A R    + G+ +GF +  S +I  ++ C V    + +    +R +   LS+
Sbjct: 156 GYRYRARLAVRFLPEKGGMRIGFHEKKSSYIADMKTCEVLPAHVSAMLMPLRFMVRKLSI 215

Query: 174 VANAEPFRITVLETLSGLDISVEGIKSVNDKQRRTLTETVLAMRGIARVSLSGEILIEPQ 233
                   + V  +++ L   V  ++ +     + L E     +    +   G   + P 
Sbjct: 216 YDRMPQLELAVGSSVTAL--VVRNLEPLTPADEQVLREFADEHKVQFWIQPGGPETVTPL 273

Query: 234 KPI---IEFG------GIPVSPPAGGFTQATKQAEDAMAE--LMLAHVGKSKRIADLFCG 282
            P+   +++        +P  P    FTQ        +    L L    +S R+ DLFCG
Sbjct: 274 YPLDVQLDYTLPEYDIRMPFKPT--DFTQVNHAINRVLVSRALRLLAPARSDRVLDLFCG 331

Query: 283 SGTFALRLARIGRVHAVEAEDKALKALDFAARNTQGLKP-VSVEKRDLFRRPLMTSE--- 338
            G F L LAR+ +        + L +   A     G+    S   R+LF    +T++   
Sbjct: 332 IGNFTLPLARVAKEVVGIEGSEVLTSRALANAELNGVAAHTSFACRNLFE---VTADDIR 388

Query: 339 -LKNYDAVVFDPPRAGAEVQCKELAR-------STVKKIVAVSCNPLTLARDLAILT-EG 389
            L ++D  + DPPR GA    K LA           ++IV VSCNP TLARD  +L  E 
Sbjct: 389 ALGHFDKFLIDPPREGALAVAKALAEIAQSGDGPLPQRIVYVSCNPSTLARDSGLLVHEA 448

Query: 390 GYRVTRVTPVDQFLWSPHVEAVAVLEK 416
           GYR+     V+ F  + HVE++A+ E+
Sbjct: 449 GYRLVGAGVVNMFPHTSHVESIALFER 475