Pairwise Alignments

Query, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 604 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  338 bits (868), Expect = 3e-97
 Identities = 200/537 (37%), Positives = 297/537 (55%), Gaps = 13/537 (2%)

Query: 8   DIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQGAKLAD 67
           ++AF L  V   E    +    D S +  DA +  A   A    AP     D    +  +
Sbjct: 10  NLAFELYEVLDAEALTRREHFADHSRETFDAAIGTARTIAEKYFAPHNRKSDEHEPQYVN 69

Query: 68  GKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMAFALAPTL 127
           G+             + EAG+++     + GG  LP++L+ A    + S ++A +  P L
Sbjct: 70  GEAVLIPEVKPAVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPML 129

Query: 128 TMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAERNGDGTYR 187
           +MGA   I T GS + K+ +L  ++ G + GTM LTEPHAGS L  ++TRAE  GDG+YR
Sbjct: 130 SMGASHLIETFGSEEQKQRFLQPMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYR 189

Query: 188 IFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAPGSRNDLF 247
           + G KIFI+ G+H  ++NI+H+VLA+LPDAP G +GISLF+VPKFL +++G+ G RND+ 
Sbjct: 190 LKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDGSLGQRNDVL 249

Query: 248 CHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNARLAVGMQ 307
              L HK+G  G+ +  +      FGD    +G+L+GE +KGLA MF MMN AR+ VGM 
Sbjct: 250 LAGLFHKMGWRGTTSTAL-----NFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMG 304

Query: 308 GVAICEAATQKAIEYAKERTQGKAPGW------QGSGMSPIIEHPDIARTLLTMKALTQG 361
            + +  A    ++ YA+ER QG+  G         S   PIIEH D+ R LL  KA  +G
Sbjct: 305 AIMLGYAGYLYSLNYARERPQGRPQGRLPDGKDPASSQVPIIEHTDVKRMLLMQKAYVEG 364

Query: 362 SRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGGM 421
           +  +    A  +D  H  E   +R +  E   LLTPI KS+ ++  +    + IQ+ GG 
Sbjct: 365 AFDLGLYSARLVDDEHTAESEEERRNASELLDLLTPIVKSWPSEYCLKANELAIQILGGH 424

Query: 422 GFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAARTA 481
           G+  E    +Y RD R+ PI+EGT+GIQ++DL+ RKL  ++GA +R  +  ++   AR  
Sbjct: 425 GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLLGLIQASCAR-- 482

Query: 482 ASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTG 538
           A+  D L    + LE  +  L + T  LL  + AG+   ALA +  Y ++FG A+ G
Sbjct: 483 AAEYDSLTALRKPLEQHIARLTSVTQALLGDLAAGKVNQALANSALYLKVFGHAVIG 539