Pairwise Alignments

Query, 325 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 808 a.a., hydrogenase maturation protein HypF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.1 bits (113), Expect = 7e-10
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 21/193 (10%)

Query: 5   INIETERETALQASVAELADGRPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLI 64
           +N +      L A+   LA G  +A+     + L  DA N  A++++ + K R +  PL 
Sbjct: 212 LNSQDNSMAVLSAAANMLAQGHILAIKGLGGFHLMCDARNSHAVSQLRQRKQR-KAKPLA 270

Query: 65  CHMADIAMAERYAVFDPISRKLAEAFWPGPLTLVLPLKP--------ESDIHSLATAGLD 116
             M  I MA++Y           EA W    TL  P +P        E D++      + 
Sbjct: 271 VMMPSIEMAKQYVTG-------TEAEWQ---TLSSPERPIVLMQALDEHDLNPEIAPNIP 320

Query: 117 TVGIRVPQGFASDLI-RRFGKPLAAPSANSSGKISPTSAAHVEADLGQKINLVLDGGAAA 175
            +G+ +P      L+  +F  PL A SAN SG+   T    + + LG  ++ ++D     
Sbjct: 321 KLGVFLPYTPLHHLLLSQFNGPLVATSANVSGEPIITDCDALISQLGHVVDAIVDHNRPI 380

Query: 176 V-GVESTIVKVEQ 187
           + G + ++V++ Q
Sbjct: 381 LNGCDDSVVQLIQ 393