Pairwise Alignments

Query, 407 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 663 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  118 bits (296), Expect = 5e-31
 Identities = 95/355 (26%), Positives = 159/355 (44%), Gaps = 26/355 (7%)

Query: 3   ERHKVKAGFSPTIDCAVLIAAAEKGFAADEGI-ELELFREQSARAVLAALGGDDIHIGHL 61
           E+  ++ G+ P + CA L+ A EK F A  G+ E+ L RE S R ++  L  + +    +
Sbjct: 277 EKVNLEIGYVPLMACAPLVVAQEKAFFAKHGLDEVSLVRETSWRGIVDGLTENYLDAAQM 336

Query: 62  PAPVPVGSAVG-LDDLPADIVGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAM 120
           PA +PV  +VG     P  IV   T+S  G+   +S   YDE    G++  D     R +
Sbjct: 337 PAGMPVWMSVGGQGGSPLPIVSSLTMSRNGNGITLSKALYDE----GIQTVDDF---RNL 389

Query: 121 ARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVLLGRDMEIIEALPKAMPALLE 180
            R  A ++       +  +    S     LRY L +  +   RD+++    P  M A L+
Sbjct: 390 LRSTADKQH------IMGIVHPASMHNLLLRYWLAANQIDPDRDVQLRTIPPAQMVADLK 443

Query: 181 SGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLR 240
            G +D  C  EP  +       G  + +   IW+  P K+L V++ WA         L++
Sbjct: 444 DGTIDGYCIGEPWNAWAAQKEIGFTIASDLEIWNGHPGKVLGVREDWANRYPNSHVALVK 503

Query: 241 ALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTS 300
           AL  A ++C + AN +EL  +L+  +Y+    E++      +  ++  D+      F  +
Sbjct: 504 ALLEACQYCEDPANWDELRELLSDRRYLSCPKEYI-----QFSQSTADDLAVPHHRF--A 556

Query: 301 AKAANFPWQSQALWFFSQMLRWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPL 355
               N P +++ LW  +Q+ RWG+VP  R       E      R  +F  A + L
Sbjct: 557 GAGVNRPSRTEHLWMMTQLARWGDVPFPR----NWVEILERVCRVGVFSTAAREL 607