Pairwise Alignments

Query, 450 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 635 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  259 bits (663), Expect = 1e-73
 Identities = 146/429 (34%), Positives = 231/429 (53%), Gaps = 4/429 (0%)

Query: 8   SLQVSQNELQAMAYSDPLTGLGNRYRLRDKIRMLASERSSDPAPFTVGIANIDGFKPIND 67
           +++ S++EL  +A+ DPLTGL NR    D+     +          + + ++D FK IND
Sbjct: 196 AIKDSEHELAYLAHHDPLTGLPNRLLFSDRTEQALASAQLHKRGCALLLLDLDHFKNIND 255

Query: 68  LFGVQAGDEILCQVAHRLKACIPDGAIVTRHDGDEFAFVLPLIFERIGAERIGNMIKDVL 127
             G   GDE+L  VA R +     G  + R  GDEFA ++    +   A  +   I D L
Sbjct: 256 SLGHNVGDELLKGVAERFRGLFAPGVTLARLGGDEFAVLVENCSQPGQAAALARRILDAL 315

Query: 128 SAPYDLGDRNVRLSSSFGFAIYPFAGDEYEDLLKSAETALYRSKRRGRGQITVYSREIAQ 187
             P    D  + +++S G +++P        LL++A++AL+++K  GR    +Y+ E+  
Sbjct: 316 KEPLRFDDHALFINASIGISLFPGDALSAGQLLRNADSALFKAKSAGRDGYALYTEELTA 375

Query: 188 EMKRATQLEQALRNAIITDAIDVHFQPIVRLEEAKVIGFEALARWNDPDLGFVSPAVFVP 247
             ++  ++   LR A+    + VH+QP+  L  +++IG EAL RW  P  G VSPA F+P
Sbjct: 376 HAQQRVEIAFELRRALQQQELRVHYQPVHDLATSRLIGVEALVRWEHPTRGLVSPAEFIP 435

Query: 248 LAEERGFIDALSEALLRKAAEAALFWPRE----LFLSFNLSSAQLMDPSTSDNILSILSR 303
           +AE  G I  +   ++ +A      W +      F++ N+SS         D +  +L  
Sbjct: 436 IAERTGLIAQVDAWVMDQACRQMCQWQQAGVALSFVAVNVSSRLFARRELYDQVAQVLHD 495

Query: 304 VGLDPHRLELEITETAVMTSADTAQRIISELQSAGVRISLDDFGTGQSSLGRLRDFTFDK 363
            GLDP  LELE+TE+AVM   + A   +  L+  GVR+++DDFGTG SSL RL+     K
Sbjct: 496 TGLDPGCLELEVTESAVMDDPEVALEQMHRLRELGVRLAIDDFGTGYSSLLRLKRLPVQK 555

Query: 364 VKIDRAFVSRISSDRPSEHIIKAIVAMCEGLDLEVVAEGIEERVEEEKLRALGCAMGQGY 423
           +KID+ FV+ +  D     I++ I+A+   + ++V AEGIE+R +   L    C +GQGY
Sbjct: 556 LKIDQGFVAGLPWDEDDAAIVRVIIALAHSMGMQVHAEGIEQREQAAFLLGQACELGQGY 615

Query: 424 FYGRPVDAA 432
           ++GRPV AA
Sbjct: 616 WFGRPVAAA 624