Pairwise Alignments

Query, 606 a.a., DNA mismatch repair protein MutL from Agrobacterium fabrum C58

Subject, 640 a.a., DNA mismatch repair protein mutL (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  261 bits (667), Expect = 6e-74
 Identities = 183/640 (28%), Positives = 292/640 (45%), Gaps = 44/640 (6%)

Query: 3   IKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNGSG 62
           I  L +++ NQIAAGEVI+RP+S  KELVENAIDA A  I +     GK  ++I D+G G
Sbjct: 5   IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64

Query: 63  MSPADLELAVRRHCTSKISTTLD--DIRTLGFRGEALPSIGSVAKLTITSRQQGAEQGSV 120
           MS  D  L+  RH TSKI    D   +RT+GFRGEAL SI +VA++ + +R +  E G+ 
Sbjct: 65  MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRLESEELGTK 124

Query: 121 ISVTGGKVSDVRPAASNAGTIVEVRDLFFATPARLKFLKTERAEAAAITEVVKRMAIAFP 180
           + + G KV      + + G+   V++LFF  PAR KFLK    E + I    +R+A+  P
Sbjct: 125 LVIAGSKVESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184

Query: 181 HIRFVLSGTDRSTLEIPSTGDDHLARMAQILGAEFKDNAIEIDAGREDVTLTGFAGVPTF 240
            + F L   D     +P +      R+  I G +     + I+     V ++G+   P  
Sbjct: 185 EVAFSLYSNDSELFNLPVS--PLRQRILAIFGKKLNQQLLNIEVNTTMVKISGYIAKPET 242

Query: 241 NRGNSSHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSITLDPAFVDVNVHPA 300
            R   +HQY FVNGR ++      A+  AY + +P G      +   +DPA +DVN+HP 
Sbjct: 243 ARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPT 302

Query: 301 KSDVRFRDPGLIRGLIVGAIRQALTR---------DGDRAATTGASQM------------ 339
           K++++F +   I  ++  +++++L +         D +      A +             
Sbjct: 303 KTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEQNLPPAPPKIHYN 362

Query: 340 --MNAFR--PGYSPSGLRPSPSATW----------SAATSPSRPLAVSGDMQFAEAAQSR 385
              N F+   G S  G    P   W          S    P +   +  +    E     
Sbjct: 363 SDFNPFKVSSGGSGGGSYSRPKVEWEGLYGGLTKASKMNEPQQEPEMDWENSPFEEEPMV 422

Query: 386 FSDITMPTARAEPREAYEASQSPSPEPVLYPLGAARAQLHENYIIAQTENGLVIVDQHAA 445
             + T+    A       AS +      +   G    Q    +I+   ++GL+++DQH A
Sbjct: 423 AEEKTISAVSAASSTFSSASSTLYANESVIEKGNLHLQFKGRFILTSVKSGLMLIDQHRA 482

Query: 446 HERLVFEEMRNALHSRRPPSQVLLIPEIIDLPEEDCDRLMDHAAGFDALGLVIERFGPGA 505
           H R++F+     +  ++  SQ +L PEI+ LP  +   L        A+G  +   G G+
Sbjct: 483 HIRVLFDRYMVQIKQKQGVSQGVLFPEILQLPASEAAVLQGIMDDLSAVGFDLSDLGGGS 542

Query: 506 IAVRETPAMLGEVNVQGLVRQLADEIAEW--DAASTLANKLEYVAATMACHGSVRSGRRM 563
            A+   P+ +  +N   LVR +     E   D    + N L   A T+A   ++  G+ +
Sbjct: 543 YAINGIPSGIEGLNPVELVRNMLHTAMEKGNDVKEEIQNIL---ALTLARAAAIVYGQVL 599

Query: 564 RPEEMNALLRQMENTPGSGQCNHGRPTYIELKLSDIERLF 603
             EEM +L+  +   P       G+     +K  DIE+LF
Sbjct: 600 SNEEMVSLVDSLFACPSPNYTPDGKTVLTTIKEEDIEKLF 639