Pairwise Alignments

Query, 348 a.a., tetraacyldisaccharide 4'-kinase from Agrobacterium fabrum C58

Subject, 338 a.a., tetraacyldisaccharide 4'-kinase (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (278), Expect = 2e-29
 Identities = 96/303 (31%), Positives = 141/303 (46%), Gaps = 30/303 (9%)

Query: 9   WWQKAGWQAWLLS----PFSLLYGKVAGRRMRTAK-----RANVPVPVICIGNFTVGGAG 59
           W+ +     WLL     P S L+  +   R +  +      A + VPVI +GN TVGG+G
Sbjct: 9   WYDRQAGVHWLLVLLLLPLSGLFYLLTSLRRQLFRLGLKASARLDVPVIVVGNITVGGSG 68

Query: 60  KTPTAIAIARAAVARGMKPGFLSRGYGGTLDVTTLVDAQHHRAAAVGDEP-LLLAREAVT 118
           KTPT I +       G +PG +SRGYG        V A    A  VGDEP +++AR  V 
Sbjct: 69  KTPTVIYLIELLRRNGYRPGVISRGYGVEFSGCKRVIA-GMPANEVGDEPAMIVARTQVP 127

Query: 119 VI--SRRRVEGAHRLVKEGVNLIIMDDGFQSARLTLDYALVVIDTVRGIGNGHLVPGGPV 176
           ++  S R   G   +  + V++II DDG Q  RL  D  ++V+D  R  GNG L+P GP+
Sbjct: 128 MVIGSDRVAAGKALMDWQAVDVIISDDGLQHYRLKRDIEILVLDGKRRFGNGLLLPAGPL 187

Query: 177 RAPLAEQMRQMTGLLKVGKGHAADPLVRQAA-----KAAKPVFVAAIMPQEPEDFRGKRV 231
           R     Q R    L+  G+G   +      A       A    V A + +  E       
Sbjct: 188 REGRWRQGRVDFTLVN-GEGSGPEEFEMALAPGNWRSVADGQVVTANVDKSHES------ 240

Query: 232 LAFAGIADPAKFYRTVEALGGDIVLSRSFPDHHHFSDDEIDDLLKDARKENLQLVTTAKD 291
           +A AGI +P +F+ T+  +G       +F DH  +S + I+ +          ++ T KD
Sbjct: 241 VAIAGIGNPQRFFDTLSEIGVQPSGQHAFDDHQAYSLEAIETV-----AAGRGVLMTEKD 295

Query: 292 AVR 294
           AV+
Sbjct: 296 AVK 298