Pairwise Alignments

Query, 185 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 3e-19
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 6/163 (3%)

Query: 1   MRIVGGEFRGRTLAAPKSNSIRPTIDRTRESLFNILSHAYPESLDGTRVLDVFAGTGAVG 60
           +RI+ G +RGR L    +  +RPT DR +E+LFN L+   P +    R LD+FAG+G +G
Sbjct: 19  VRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNA----RCLDLFAGSGGLG 74

Query: 61  LEALSRGCRVALFVENGVEGRGLLWENIDALGLHGRARILRRDATKLGGVNNIEPFDLLF 120
            E  SR       +E        L  N+ +L       ++  DA      +  +P+D++F
Sbjct: 75  FECASRQANQVTMLELNPLAFQQLKTNVQSLKAE-NIELIHTDALAFLRQSG-KPYDVVF 132

Query: 121 ADPPYGHGHGEKAFAAAHAGGWLTSGALAILEERGDVTVTVEP 163
            DPP+  G  ++        GWL   A+  +E   ++ +T  P
Sbjct: 133 IDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELP 175