Pairwise Alignments

Query, 544 a.a., GroEL chaperonin from Agrobacterium fabrum C58

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

 Score =  123 bits (309), Expect = 2e-32
 Identities = 142/557 (25%), Positives = 246/557 (44%), Gaps = 63/557 (11%)

Query: 9   GRSAREKMLKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFEN 68
           GR A+   +    I+A+ V+ TLGPKG + ++    G   +T DGV++ +E+ +    E+
Sbjct: 17  GRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EH 72

Query: 69  MGAQLVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVAEVV 128
             A+++ EVA       GDGTTTA V+A  ++R+  + +   ++P             VV
Sbjct: 73  PAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHP-----------TIVV 121

Query: 129 KDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQRVGNEGVITVEEAKTAETELE 188
           K  QA A+K    E +  +       +++I   I  AM  +  +G    +E K AE  +E
Sbjct: 122 KGYQAAAQK--AQELLKTIACEVGAQDKEILTKI--AMTSITGKGAEKAKE-KLAEIIVE 176

Query: 189 VVEGMQFDRGYLSPYFVTNPEKMVADLEDAYIL---LHEKKLSNLQAMLPVLEAVVQTGK 245
            V  +  D G +    +   +K  A ++D  ++   L +K+  + Q    V +A +    
Sbjct: 177 AVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLN 236

Query: 246 PLVIIAE-DVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAI---LTGGTVI 301
             + I E + + E   T               K   F ++ + ML+D+      +G  V+
Sbjct: 237 CAIEIKETETDAEIRIT------------DPAKLMEFIEQEEKMLKDMVAEIKASGANVL 284

Query: 302 SEDLGIKLESVTLDMLGKSKKVSISK------ENTTIVDGAGQKSDIEGRVAQIKAQ--- 352
               GI  + +    L K   V+  +      E      GA   ++I+   AQ       
Sbjct: 285 FCQKGI--DDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGL 342

Query: 353 IEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEG-I 411
           +EE     D     E          +IR  G+TE  ++E    +DDA+      +++G I
Sbjct: 343 VEERKISGDSMIFVEECKHPKAVTMLIR--GTTEHVIEEVARAVDDAVGVVGCTIEDGRI 400

Query: 412 VPGGGVALLRSSTKIT--VKGVNDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKIL 469
           V GGG   +  S K+    +G++  ++  +     AL+ + R +AENAG +A  ++ K+ 
Sbjct: 401 VSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVR 460

Query: 470 DKNEDN----YGYNAQTGEYGDLIALGIVDPVKVVRTALQNAASVASLLITTEAMIAELP 525
             +  N     G N  TG   D+   G+V+P++V   A+Q+AA    +L+  + +IA   
Sbjct: 461 AAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIA--A 518

Query: 526 KKESAMPQMPGGGMGGM 542
           +K    P M  G MGGM
Sbjct: 519 EKLRGAPDM--GDMGGM 533