Pairwise Alignments

Query, 375 a.a., histidyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 260 LQAPLPQASQVLGDFAARAKLKLDGALSAFDKRVAALANAGVDLETVTYGAAFGRPLDYY 319
           +QA L  A Q+     A +K    G     D        AG++    T      R LDYY
Sbjct: 215 VQAILGDAPQLSDYLDAESKQHFAGLCELLDA-------AGIEY---TVNQRLVRGLDYY 264

Query: 320 TGLVFEVV--EAGSDSVLAGGGRYDRLLTLLGAQEKIPAVGFSLWLDRI 366
              VFE +    GS   + GGGRYD L+  LG  +  PAVGF++ L+R+
Sbjct: 265 NRTVFEWITESLGSQGTVCGGGRYDGLVEQLGG-KPTPAVGFAMGLERL 312



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 18/200 (9%)

Query: 23  SRVNTPVIQPAEPFLDMAGED---LRRRIFMTESETGESLCLRPEFTIPVCLRHIETAT- 78
           S V  P+++    F    GE    + + ++  E   G+SL LRPE T       IE    
Sbjct: 39  SEVRMPIVEMTHLFSRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLL 98

Query: 79  -GTPKRYSYLGEVFRQRREGAS---EFYQAGIEDLGDTDIAAADARVVIDATAILQRLLP 134
               +R  Y+G +FR  R       +F+Q G+E  G  D    DA +++    + + L  
Sbjct: 99  YNQEQRLWYMGPMFRHERPQKGRYRQFHQCGVEVFG-LDGPDVDAELIMMTARLWRELGI 157

Query: 135 GRSLAVTLGDQQVFEAVVAALGLPLGWQKRLVQAFGDMAQ-LDALLESLVHPKPMTGLDA 193
            + + + L         + +L     ++  L+         LD   +  ++  P+  LD+
Sbjct: 158 AQHVRLELNS-------IGSLEARANYRTALIDYLEQYQNVLDEDCKRRMYTNPLRVLDS 210

Query: 194 RVAGLLA-TGDEAVLVDYLD 212
           +   + A  GD   L DYLD
Sbjct: 211 KNPDVQAILGDAPQLSDYLD 230