Pairwise Alignments

Query, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 68/231 (29%), Positives = 118/231 (51%), Gaps = 16/231 (6%)

Query: 14  VAQEATGEQFNYLANVLRMTDGAEILLFNGRDGEWKAKLSFPSRKKISLVPLEQTRPQPD 73
           ++++A G    ++  VLRM  G E+LLF+G   E+ A +S   +K++ +   E+     +
Sbjct: 20  LSEDAAG----HIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKKQVLVNITERVENSIE 75

Query: 74  AA-ELHYLFAPLKVGRMDYLVQKAVEMGAGLLQPVMTQHVQGKIHNS------EKLRANA 126
           +  +LH      +  +M++ +QK+VE+G   + P++++    K+         ++ +  A
Sbjct: 76  SPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLDEKRFEKKIQQWQKIA 135

Query: 127 IEAAEQCGILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDAGQNPLPILQAVKERKIAL 186
           I A EQCG  ++PE+   + L+       E  ++          N LP        K+ L
Sbjct: 136 ISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLNTLP----TPVSKVRL 191

Query: 187 LVGPEGGFSEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQAVIGD 237
           L+GPEGG S EE  + R   F   + LGPR+LR +TAA+ A+A +Q   GD
Sbjct: 192 LIGPEGGLSAEEIDMTRRYQFEETL-LGPRVLRTETAALTAIAALQVRFGD 241