Pairwise Alignments

Query, 717 a.a., glycyl-tRNA synthetase, beta chain from Agrobacterium fabrum C58

Subject, 688 a.a., glycine--tRNA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (877), Expect = 4e-98
 Identities = 245/734 (33%), Positives = 371/734 (50%), Gaps = 76/734 (10%)

Query: 3   DLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLNAR 62
           + L+EL +EE+P +  R  A          L    + +EG   + TPRRL L +  L   
Sbjct: 4   EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63

Query: 63  SADVREEKKGPRT----DAN---EKAIEGFLRGAGLNDISEAQVVSDPKKGDFYIAIINK 115
             D   EK+GP      DA+    KA EG+ RG G+      ++V+D  KG++ +     
Sbjct: 64  QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121

Query: 116 PGRPAEEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIV 175
            G+    ++ E+    + + P  K MR G                  +  +++RP++++ 
Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWG-----------------DKETQFIRPVKTLT 164

Query: 176 CLFGPEHDETQVIPFVIDGIVAGNITYGHRFHAPGPITVRRFEDYVSNLE-KAKVILDAD 234
            LFG E  + +++     G+ +     GHRF      T+   E Y + LE + KVI D  
Sbjct: 165 ILFGSELIQGEIL-----GVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYA 219

Query: 235 RRKDIILHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLT 294
            RK +I+  ++  A   G     ++ L+EEV+ LVEWP V+   FEE +L++PAE +  T
Sbjct: 220 TRKAMIIEGSQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYT 279

Query: 295 IKTNQKCFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRD 354
           +K +QK F   +  A + L   FI +SNIE+ +  + I+ GN KVVR RL+DA  F+N D
Sbjct: 280 MKGDQKYFPVYD--ASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFFFNTD 336

Query: 355 QGDLPDLETLKDSAAKFDLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKAL 414
           +                    K+PL  R+  L+  N  F  +LGT  ++  RI ELA  +
Sbjct: 337 R--------------------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYI 374

Query: 415 APVVGADGALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENESVAAAIEDHYK 474
           A  +GAD     RA +LAK DL T  V EF + QG+MG  YA   GE E VA A+ + Y 
Sbjct: 375 AEQIGADVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYM 434

Query: 475 PQGPSDRLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKN 534
           P+   D LP+  V+  VA+ADKLDT+VG + I + P GS DPFALRRA+LGV+RIL+E  
Sbjct: 435 PRFAGDELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYG 493

Query: 535 VRLPLLSVAR---------------DSDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESD 579
            +L L+ +                 + +++ F   R   + +D G   D+I AVL     
Sbjct: 494 YQLDLVDLIAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPT 553

Query: 580 DLLMIARRVEALTAFITGEDGRNLLAGAKRATQLLAAEEKKGTVVADGVSEELLKLDAEK 639
                 +RV+A++ F   E+   L A  KR   +LA   K    + + +   LL+ DAEK
Sbjct: 554 KPADFDQRVKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEK 610

Query: 640 ALYAAIKTASADAAKAVEGEDFRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALL 699
           AL  A++  +     A    +++ A+  L+ LRAPVD FF++V+V  +D A++ NRL LL
Sbjct: 611 ALAEAVEIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLL 670

Query: 700 KAIREATGTVADFS 713
             +R     +AD S
Sbjct: 671 NKLRNLFLQIADIS 684