Pairwise Alignments

Query, 260 a.a., proteinase sohB from Agrobacterium fabrum C58

Subject, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 14/202 (6%)

Query: 4   GNQFRPALNLASYAPLLEKAFAVKDAPAVAISLNSPGGSPVQARMIYNRIRQLAEEKDKK 63
           G+Q R  +   + A LL +A    +  AV + ++SPGGS   + +I N I  L +   K 
Sbjct: 339 GSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEAL-KAAGKP 397

Query: 64  VLIFVEDVAASGGYMIALAGDEIIADPTSIVGSIGVVSGGFGFPEMLRKIGVERRVYTAG 123
           V++ +  +AASGGY I+++ D+I+A PT++ GSIG+ S    F + L  +G    +YT G
Sbjct: 398 VVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNNLG----IYTDG 453

Query: 124 ENKVILDPFQPE------KEGDIDYLKSLQVEIHNVFIDMVKMRRGSKLKGDDALFSGLF 177
              V   PF  +       +G  D ++      +  FI +V  +RG  LK  D L  G  
Sbjct: 454 ---VGTTPFSGQGLTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDELAQGRV 510

Query: 178 WTGMRGLDLGLIDGLGDMREVL 199
           WT      LGL+D LGD  + +
Sbjct: 511 WTAQDAQTLGLVDQLGDFDDAV 532