Pairwise Alignments

Query, 338 a.a., octaprenyl-diphosphate synthase from Agrobacterium fabrum C58

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 29  ERVNQLI---LSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYEGDNHIKLAT 85
           +R NQ +   L+R       + E   + +  GGKR RP L   +  M G E  +    A+
Sbjct: 10  QRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPAS 69

Query: 86  SVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMMVDVGSL 143
           +VE +H  +L+HDD+  +D+ +LRRGK T    +    ++L GD L   AF ++ + G L
Sbjct: 70  AVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE-GDL 128

Query: 144 DA---------LDVLSTAASV--IAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAA 192
            A         L  L+ A+    +  G+ L L+ A+N   + ++   + R KT AL   A
Sbjct: 129 SAAGETQRVAMLQALAEASGAQGMCLGQALDLA-AENRLISLEELETIHRNKTGALMRCA 187

Query: 193 AEVGPIVA-KTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKIT 251
             +G + A +  +A    L  Y   +GLAFQ+ DD+LD    +  LGK  G D    K T
Sbjct: 188 IRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKST 247

Query: 252 LPVILSYRRGTQDERAFWRNAIEKGESSDENLE 284
            P +L      Q      + A+   E+   N E
Sbjct: 248 YPALLGLEGAQQKAHTLLQEALLALEAIPYNTE 280