Pairwise Alignments

Query, 338 a.a., octaprenyl-diphosphate synthase from Agrobacterium fabrum C58

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  152 bits (383), Expect = 1e-41
 Identities = 101/316 (31%), Positives = 162/316 (51%), Gaps = 17/316 (5%)

Query: 35  ILSRAGSDVQMIPE-------VANHLISSGGKRLRPMLTLASASMFGYEGDNHIKLATSV 87
           ILS+  S+++   E        + HL+ +GGKR+RP L++ +  +   E    +  A SV
Sbjct: 7   ILSKIDSELKKYMEKDTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSV 66

Query: 88  EFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMMVDVGSL---- 143
           E +H  TL+HDD++D  D RRG  T  T++G   ++L GD L  +AF  + ++       
Sbjct: 67  ELIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAH 126

Query: 144 DALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTD 203
           + L VLS A   + EG+   +   +   T  D+YL++I  KT AL  A  E+G ++A   
Sbjct: 127 EVLKVLSKACVEVCEGQTEDMEFEERFPTL-DEYLEMISKKTGALIVAPVEIGAVMADCT 185

Query: 204 KASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVILSYRRGTQ 263
              R AL +Y   +G+ FQ+ DDVLD  G    +GK  G D  EGK T+ VI +    ++
Sbjct: 186 PEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSE 245

Query: 264 DERAFWRNAIEKGESSDENLEKALGLIT-KYNGLGDTIGRATHYGTIARDALAPLPQSPW 322
           D++      +   +++ + + +A+ L+    N   DT+  AT     A+D L        
Sbjct: 246 DKKERLLQILGNQDANQQEVAEAIELLADSINYAKDTMKNATEE---AKDYLKIFDAEKR 302

Query: 323 KNALLEVIDFCIERLN 338
           KN L  + DF IER++
Sbjct: 303 KN-LENIADFIIERIH 317