Pairwise Alignments

Query, 338 a.a., octaprenyl-diphosphate synthase from Agrobacterium fabrum C58

Subject, 321 a.a., octaprenyl-diphosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  182 bits (463), Expect = 8e-51
 Identities = 106/310 (34%), Positives = 171/310 (55%), Gaps = 1/310 (0%)

Query: 27  DMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYEGDNHIKLATS 86
           +  R N  + +  G+   ++  VA H++ +GGKRLRP+LTL  A   GY  D+   LA S
Sbjct: 11  EQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYADDDIYPLACS 70

Query: 87  VEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMMVDVGSLDAL 146
           VE +H+ATLLHDD++D++DLRRG + A T++G+ A+VL GD LL  A  ++   G     
Sbjct: 71  VELLHSATLLHDDILDDADLRRGMAAAHTVFGSTATVLAGDALLALANLIVARYGDPRLT 130

Query: 147 DVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKAS 206
             +S A    A GE+++++  +  +   D Y+ +I  KTA +  A+ E+G + A   + +
Sbjct: 131 ACISEAIIRTATGEIVEIAHMRGTDHGRDTYIDIITGKTAWMLRASCELGALRAGASEEA 190

Query: 207 RSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVILSYRRGTQDER 266
             A  ++G++LG+AFQ+VDD LD+  + AD GK  G D REGK+T P+I      +  ER
Sbjct: 191 VRAAAAFGLDLGIAFQIVDDALDFADR-ADTGKPVGGDLREGKLTPPLIYYLETLSGPER 249

Query: 267 AFWRNAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAPLPQSPWKNAL 326
             + +    G  S +++ +    I     +  T   A +Y   A  +L  LP  P +  L
Sbjct: 250 EAFISRFRDGGFSGDDVARISAEIRALGIIERTRELAGNYIEKAAASLETLPDCPERRTL 309

Query: 327 LEVIDFCIER 336
           ++ + +   R
Sbjct: 310 MQTLAYVQHR 319