Pairwise Alignments

Query, 614 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 303 a.a., lipoprotein NlpI from Vibrio cholerae E7946 ATCC 55056

 Score = 44.3 bits (103), Expect = 7e-09
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 432 VFFQRGIAYERLKQWDKAEPNFKRALELNPEQPQVLNYLGYSWVDKGINLDEGMKMISRA 491
           + F+RG  Y+ +   D A  +F ++L +NP QP V N LG  + + G   D   +     
Sbjct: 68  MLFERGNYYDSVGLRDLARLDFTQSLSINPAQPDVFNLLGVYYTEAG-EFDAAYESFDST 126

Query: 492 VELRPNDGYIVDSLGWAHY 510
           +EL P++ Y V +   A Y
Sbjct: 127 LELDPSNEYAVRNRAIALY 145



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 8/186 (4%)

Query: 230 AVMALARLEASAGNKQKALDAIAVGDTFAPNYAPLKA-LREAIEKGEKPE--QQITNAVE 286
           AV+ L  L   A   + A   +     + P   PL+A +++ ++     +  Q+     E
Sbjct: 9   AVIGLVLLSGCATQNESATQWL-----YPPMAVPLQASIQQEVQIARLSQLLQRTDLEPE 63

Query: 287 GAASVMFSIAGALNREGAEEIVTLYLQTSRALDPKSPDTLILLGGLAEAMKQPERAITFY 346
             A ++F      +  G  ++  L    S +++P  PD   LLG       + + A   +
Sbjct: 64  IRAKMLFERGNYYDSVGLRDLARLDFTQSLSINPAQPDVFNLLGVYYTEAGEFDAAYESF 123

Query: 347 REVPKDSPMHRISELQLGLTLAQTGKVEESRKHLLSLLESDPKDIRSYLAYGSVLSDAKD 406
               +  P +  +     + L    + + + + +    + DP+D    L    + SD   
Sbjct: 124 DSTLELDPSNEYAVRNRAIALYYGERPQLALEEITKHYQQDPQDPFRALWLYIIESDIDP 183

Query: 407 YKAMAE 412
            KA  E
Sbjct: 184 TKARTE 189