Pairwise Alignments

Query, 614 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 31/185 (16%)

Query: 391 IRSYLAYGSVLSDAKDYKAMAENYDKAVEVIGAVPQKSDWSVFFQRGIAYERLKQWDKAE 450
           I+ + ++G++L +++ Y    E YDK   ++   P   D+   F +G+ + +LK+++KA 
Sbjct: 7   IQKWHSHGALLCNSEKYAEALECYDK---ILSYYPD--DFLAVFGKGMVFLKLKEYEKAL 61

Query: 451 PNFKRALELNPEQ-PQVLNYLGYSWVDKGINLDEGMKMISRAVELRPNDGY-IVDSLGWA 508
             F   L +NP   P + N                 K +   ++ + ++ Y     LG  
Sbjct: 62  QCFNSVLNMNPSYIPAIKN----------------KKQVEEKLKKQESENYNKFSKLGVE 105

Query: 509 HYRLGDFDQSVTELERAIELKAGDPTINDHLGDAYWRVGRKIEAVYQWNRALIGDNDDVD 568
           +Y+ G+F++S++  E+A E+     T+  ++     R+  K     +WN      N  V+
Sbjct: 106 NYKQGNFEKSLSYFEKAFEINPYSETLRKNIETT--RLKLKEILPIRWN------NKGVE 157

Query: 569 KAKVK 573
             KVK
Sbjct: 158 YYKVK 162



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 20/27 (74%)

Query: 436 RGIAYERLKQWDKAEPNFKRALELNPE 462
           +G+ Y ++K + KA   F++A++LNP+
Sbjct: 154 KGVEYYKVKNYQKALECFEKAVKLNPK 180