Pairwise Alignments

Query, 299 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase from Agrobacterium fabrum C58

Subject, 314 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase from Synechococcus elongatus PCC 7942

 Score =  114 bits (284), Expect = 4e-30
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 24/288 (8%)

Query: 16  APAKINLALHVTGQRADGYHLLETLVTFTAAGDMIRIRDAATDSFSISGPFGDLLSAGDS 75
           APAKIN  L + G R DG+H L  ++   A GD + +R      F +     DL      
Sbjct: 8   APAKINFYLEILGDRPDGFHELAMVMQSIALGDRLHLRQRQGQGFQLGCDRADLEV---D 64

Query: 76  GDNLVTRARDILRDALASTGQPARPVDIHLEKNLPVASGIGGGSADAAATLRGLLRHWDA 135
             NL+ +A   L+ +    G     VD  LEK +P+ +G+ GGS D AA L GL      
Sbjct: 65  ERNLILKAAQRLQRSFPQIGG----VDFFLEKRIPIGAGLAGGSTDGAAALVGLDIFSGL 120

Query: 136 AIAPEKLKSLALKLGADVPMCLASRPLIARGIGEDIEALTDLPELSMVLAN-PLKAVSTP 194
            +   +L+++A +LG+D+P C+A    +    GE +  L  LP LS+VLA     +VSTP
Sbjct: 121 GLTQPELEAIAAELGSDMPFCVAGGTQLCTSRGEQLTPLPPLPSLSLVLAKFESLSVSTP 180

Query: 195 EIFRRLQNKVNPH--------------LPTPSTIGWATTGWMDFLAQS-RNDLQPPAQAL 239
             + R + +                  L     +   + G    +AQ  RNDL+      
Sbjct: 181 WAYGRYREQFGDRYLQTEPARRDRLQALHAGPLLQAMSAGDPVAIAQHLRNDLEAVVLPE 240

Query: 240 LPEIGEITGLLSE-EGATLVRMSGSGATCFGIFHSFDAAKNAETSLRK 286
            P++ E+  +L    G    +MSGSG + FGI  +  AA+ A   +R+
Sbjct: 241 YPQVAELRSVLGNCSGILAAQMSGSGPSVFGIAENPTAAQAAVEQVRQ 288