Pairwise Alignments

Query, 1275 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1288 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 7e-37
 Identities = 93/263 (35%), Positives = 140/263 (53%), Gaps = 16/263 (6%)

Query: 1016 IRDITQWKRTEEELRNAKRAAETANAHKTDFLARVSHEIRTPLNAIIGFSDM---MATER 1072
            ++DIT+ ++ +     A+ AAE     K++FLA +SHEIRTPLNAI+GF+ +      E 
Sbjct: 643  LQDITERRQADATREAAREAAEQLARIKSEFLANMSHEIRTPLNAILGFAQLGQRETPES 702

Query: 1073 FGPIGNPRYVEYANDIGRSGRHVLDIVNDLLDISKIEAGQMDVDFIAVPLNETVAEAVSL 1132
               IG  R       I  +G+H+L I+ND+LD SKIEAG+M ++       E V   V L
Sbjct: 703  RARIGFQR-------IHDAGQHLLGIINDILDFSKIEAGKMKLEMQPTNPCEVVDHVVKL 755

Query: 1133 VQPQANNQRVIIRTALAQSVPQIV-ADLRSIKQIVLNILSNAIRFTPSGGQIVVSTAYEA 1191
            +      + + +R   + ++P     D   + Q++LN+L NA++FT  G    ++   E 
Sbjct: 756  MAASVFQKGLELRVEESDNLPAAFDGDSLRLAQVLLNLLGNALKFTDQGS---ITLREER 812

Query: 1192 NG-SVSLRIRDTGIGMTRAELEQAMKPFRQVASSGKRVRGDGTGLGLPLTKAMVDANRAN 1250
            +G  +   IRDTGIGM R +L +    F Q    G   R  GTGLGL +TK +V+    +
Sbjct: 813  DGQDLIYSIRDTGIGMNREQLGRLFHAFEQ-GHGGASRRFGGTGLGLTITKRLVEMMGGS 871

Query: 1251 FSITSTPNEGTLVEITFPSQRVL 1273
              + STP +GT   I  P   V+
Sbjct: 872  IEVESTPGQGTCFSIRIPMHNVV 894