Pairwise Alignments

Query, 526 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 78.6 bits (192), Expect = 6e-19
 Identities = 124/525 (23%), Positives = 204/525 (38%), Gaps = 64/525 (12%)

Query: 23  ANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEFPLRRILSAALVLPLAIPSYLAA 82
           A++  R  F T  +     + +   G V AWL++  +   RR  + AL++P  +P++  A
Sbjct: 97  ADLFWRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFA 156

Query: 83  YAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLGGAVIVLSSVLY--PYVYLSARA 140
            A+             V    G+        PD  + G   I +   L+  P+V L   +
Sbjct: 157 LAWTTLFK-----NRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVILLFGS 211

Query: 141 ALSMQGRFAAEAARTLGAKPLNVFFSVQLPMARPAIAIGLSLVLMETLNDIGAVEYLGVQ 200
           AL        ++AR LGAK   V   + LP+ RPA+   + L+  + L + G    LG+ 
Sbjct: 212 ALRRFDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGL- 270

Query: 201 TLTFTIYETWLNRGNLANATQIAAVI-----LIIVSALIVIERNAREKQRF------GAP 249
            + F +  T L R   +  T +A VI     LI +  L +  R  RE +RF      G+ 
Sbjct: 271 PVKFEVLSTSLFRSIASRQTGVAGVIAGSIMLIGIITLWIDARLVREARRFVTIGSKGSM 330

Query: 250 KATSMAQRHRLKALAGWRRWCASLFCFLP-----------VASGFFIPVIVLGGYAAKRL 298
              S   R RL A AG+      L   LP           + + F +    L  +  + L
Sbjct: 331 NRQSRLGRMRLPA-AGFAATVFLLSVGLPLLTLLLSTVMKMPARFTLDNFTLDYWIGRDL 389

Query: 299 DA-------LFQPKLLKALGHSLEV----SLSAAFLTLIAAFVFSYAIRTERSRLSKVAA 347
           D        L    L  A  ++L +    S+++  L L+  +V    IRT    LS    
Sbjct: 390 DTIALKTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYV---VIRTPVRLLSVYLR 446

Query: 348 RLGSMGYGVPGTVLAIGVLIPLASLDNGVDGFIRSHFGFSSGLL--LSGTAFAIIYAHAV 405
           ++  + Y VPG   A   L               S F    G L  L GT   ++ A   
Sbjct: 447 QVTFLPYLVPGIAFAAAYL---------------SLFAVPRGPLPALYGTVVILVLALIA 491

Query: 406 RFMTMAEGTLDAGFHKLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESM 465
             M  A     +   +L    + A++  G    + +  +++P  + + +T  LL  I  +
Sbjct: 492 DQMPYASRAGISAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGI 551

Query: 466 KELPATILLRPFGFNTLATLVYEDASRSRVQDAAVPAIIIIMAGL 510
           K L   ++L     + L T           Q  A  A+++I+A +
Sbjct: 552 KGLSLFVILAVPSTDVLTTYSLRLVDYHYTQ--AANAVVLIIAAI 594