Pairwise Alignments

Query, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 327 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (362), Expect = 4e-39
 Identities = 89/281 (31%), Positives = 144/281 (51%), Gaps = 17/281 (6%)

Query: 16  LVVAVPYFWLLLFFAAPFLIIVKISLSDTAISMPPYTPVFEGFSKLGEFFSQLDFENYLF 75
           L+  VP FW+      P   + +IS       M  Y    +G S            NY  
Sbjct: 50  LLAGVPLFWIAALHIGPIFQMGRISF------MADYPQAPDGGSPY-------TLANYEL 96

Query: 76  LTEDPLYIEAYLSSLRIAFISTFLLLLIGYPMALAMAR-APSSVRPTLVMLVILPFWTSF 134
              D LY   ++ SL  A + T   L+I YP+A  +A+      R   ++L+++PFW   
Sbjct: 97  FFSDQLYFMPFIRSLIFAAVVTISTLVIVYPVAYYVAKIVQPKNRMRALLLLLIPFWAGE 156

Query: 135 LIRVYAWIGILKPEGLLTVLFQWLGFLGPDQQVNIFRTETAIFIGIVYSYLPFMVLPLYS 194
           LIR ++ I +L   G + V  + LGF+  D+ + +  T  ++  G++Y    +M+LPLYS
Sbjct: 157 LIRTFSVIMLLANRGAVNVALRELGFI--DRPIPMLYTSFSLSFGVIYLLALYMLLPLYS 214

Query: 195 ALEKLDNTLLEAAADLGCPPWKAFWKITFPLSLPGVVAGAMICFIPITGEFVIPDLLGGA 254
           A+EK+   L+ AAADLG  P++ F ++  PLS  G+V+G  + ++   G F  P LLGG 
Sbjct: 215 AIEKIPTPLIHAAADLGAGPFQRFRRVILPLSKDGIVSGCSLVYLTSVGVFAAPLLLGGP 274

Query: 255 QTLMIGKTLWTEFFGNRD-WPLASAVAVLLLILLVVPIAIF 294
            T++  + + T F  + D WP  +A A+LLL + +  + +F
Sbjct: 275 NTVIFPEVIATLFHSSNDKWPEGAAFAMLLLAVSLSTVGLF 315