Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 365 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

 Score =  440 bits (1131), Expect = e-128
 Identities = 214/363 (58%), Positives = 271/363 (74%), Gaps = 1/363 (0%)

Query: 3   NRSLRLTLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDGN 62
           N   +  LA+T A   AG+A AQEKV+HVYNWSDYI    LE+FTKETGIKVVYDV+D N
Sbjct: 2   NPFAKTLLAMTLAGTVAGAAQAQEKVLHVYNWSDYIAEDTLENFTKETGIKVVYDVFDSN 61

Query: 63  EVLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDP 122
           EVLE KLLAGSSGYDVV P++PFLA+QIKAGV+QKLDKSKLPN +N   D+ + L   DP
Sbjct: 62  EVLEAKLLAGSSGYDVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLLKALEPSDP 121

Query: 123 GNEYAVNYMWGTTGIGYNVAKVKAALGD-VPVDSWDVLFKPENAEKLKSCGINILDASDE 181
           GN+Y++ YMWGT GIGYNV KVKA LGD  PVDSWD++FKPEN EKLKSCG+  LD+  E
Sbjct: 122 GNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVAFLDSPTE 181

Query: 182 TFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSG 241
               A++YLG  PDS +  +L+   +++ +IRP+V  F+SS YI+DLANG+ C++IG+SG
Sbjct: 182 MLPAALHYLGYAPDSGKADELKKAEDLFMQIRPHVAYFHSSKYISDLANGNICVAIGYSG 241

Query: 242 DILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAA 301
           DI Q K+RAEEA NGV V Y IPKEG   + D  A+PADAKNV+ AHAFINY+MKP+V A
Sbjct: 242 DIYQGKSRAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAKNVESAHAFINYLMKPDVMA 301

Query: 302 KASDYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQI 361
             ++YVQ+ NGN  +  L+D ++  + G+YP    ++KL+T     PK QR + R WT+I
Sbjct: 302 SITNYVQFPNGNAAATPLLDEAIRTDEGIYPSQAVLQKLYTFPDLDPKTQRAMTRSWTKI 361

Query: 362 KTG 364
           K+G
Sbjct: 362 KSG 364