Pairwise Alignments

Query, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 281 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  120 bits (300), Expect = 6e-32
 Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 9/219 (4%)

Query: 169 IGQSFVNSLTVAVPATVIPILIAAFAAYALSWMNFSGRNLLIAMVVGLIVVPLQMSLIPL 228
           +G  F NS+ + VPA +I   I A   Y LS   F G  L   +++    +P Q  L+P 
Sbjct: 70  VGGYFWNSVKITVPAVLISTFIGAMNGYVLSMWRFRGSQLFFGLLLFGCFLPFQTVLLPA 129

Query: 229 LRLYNEIGTIFGVPSKTYAGIWLAHTAFGLPLAIYLLRNYISGLPKEIIESARVDGASDF 288
                ++G      + T  G+ L H  +GL       RNY   +P  ++++AR+DGA  F
Sbjct: 130 SFTVGKLGL-----ANTTTGLVLVHIVYGLAFTTLFFRNYYVSIPDALVKAARLDGAGFF 184

Query: 289 EIFVKIILPLSFPALASFAIFQFLWTWNDLLVAMVFLGTQKDELVLTGALNALLGSRGG- 347
            IF KI+LP+S P +    I+QF   WND L  +VF     D   +T ALN L+ +  G 
Sbjct: 185 TIFGKILLPMSIPIVMVCLIWQFTQIWNDFLFGVVF--ASGDAQPITVALNNLVNTSTGV 242

Query: 348 -NWEILTASAFVTIIVPLGVFFALQRYLVRGLLAGSVKG 385
             + +  A+A +  +  L V+    +Y +RGL +G+VKG
Sbjct: 243 KEYNVDMAAAMIAGLPTLLVYIFAGKYFLRGLTSGAVKG 281