Pairwise Alignments

Query, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 298 a.a., carbohydrate ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  291 bits (745), Expect = 2e-83
 Identities = 145/230 (63%), Positives = 181/230 (78%), Gaps = 5/230 (2%)

Query: 155 FTLDNYRTVLTSEGIGQSFVNSLTVAVPATVIPILIAAFAAYALSWMNFSGRNLLIAMVV 214
           F L NY  VL S G+G++F+NSLT+AVPATVIPI IA FAAYA +WM F GR LL  +VV
Sbjct: 73  FYLGNYGDVLRSSGMGEAFLNSLTIAVPATVIPIAIATFAAYAFAWMTFPGRQLLFILVV 132

Query: 215 GLIVVPLQMSLIPLLRLYNEIGTIFGVPSKTYAGIWLAHTAFGLPLAIYLLRNYISGLPK 274
            L+VVPLQ +LIP+LR+Y ++G      + T+ G+WLAHTA+GLPL IYLLRNYI  LPK
Sbjct: 133 CLLVVPLQTTLIPVLRVYAQLGL-----AGTFLGVWLAHTAYGLPLGIYLLRNYIGALPK 187

Query: 275 EIIESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVAMVFLGTQKDELVL 334
           ++IE+A VDGAS  +IF K+I+PLS PA+ASFA+FQFLW WNDLLVA+V+LG   D   +
Sbjct: 188 DLIEAAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLVALVYLGGTADVAPV 247

Query: 335 TGALNALLGSRGGNWEILTASAFVTIIVPLGVFFALQRYLVRGLLAGSVK 384
           T  L+ L+GSRG +W +LTA AF+++IVPL VFF LQRY VRG+LAGSVK
Sbjct: 248 TIQLSNLVGSRGQDWYLLTAGAFISMIVPLMVFFGLQRYFVRGILAGSVK 297



 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 29/42 (69%)

Query: 14 RLIVHASVLLVVLLWLLPTLGILVSSLRDKDQITVSGWWTAF 55
          +L +H ++L +  +W LP+LG+ +SSLR +  +  +GWWT F
Sbjct: 23 KLPIHIAILTIAFIWTLPSLGLFISSLRPRGDMLSTGWWTVF 64