Pairwise Alignments

Query, 306 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 15/237 (6%)

Query: 25  PWLFIGPALILLLVYLVYPVIATLILSF--YDRTGAE----FVGLANYRWAFFDAGFRQS 78
           P L + PA I+L V++V P+I +L  SF  +  T  +    F+G  NY     +A F  +
Sbjct: 9   PTLLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVA 68

Query: 79  IFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIA-KSIVFMPMAISFVGASVIWKFIYE 137
               +L L V   A  F GL +A++ ++  +G  A ++ +  PM  S V     +KF++ 
Sbjct: 69  FGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFN 128

Query: 138 YRAEGQVQIGLLNAVVEFFGGSPEV--WISMPFWNNFFLMVILIWIQTGFAMVILSAALR 195
                   IG +N  ++  G +     W+       F ++V  +W  T    +++ A L 
Sbjct: 129 DN------IGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLL 182

Query: 196 GIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNG 252
            +P++ +EAA +DG   WQ F  +  P +     +  T  ++ V + +DIV  MT+G
Sbjct: 183 AMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDG 239