Pairwise Alignments

Query, 306 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 25/292 (8%)

Query: 12  HASR---NLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGA---EFVGLAN 65
           HA R   +   R  +  +LF+ P  + L ++L  P+  +L+LS ++  G     FVG  N
Sbjct: 13  HAGRTRLSAKHREWIAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARN 72

Query: 66  YRWAFFDAGFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGN-IAKSIVFMPMAIS 124
           Y   + D  F +      L+ A++       GL +A++  R    N I +S+ F P  +S
Sbjct: 73  YLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVS 132

Query: 125 FVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSPEVWISMPFWNNFFLMVIL---IWI 181
            V  +++W+F+   +      +  L A ++  G      IS+    NF L+ I+   +W 
Sbjct: 133 LVVVALVWQFMVVDKIG---VVSRLTAALDIGG------ISLLGDPNFALITIVLVSVWF 183

Query: 182 QTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGT---IAVVWTTITIL 238
             GF M+I    L+ IP +  EAA+IDGA     FW I +P +  T   + +V     + 
Sbjct: 184 LMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVA 243

Query: 239 VLKVFDIVLTMTNG--QWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAV 288
             + FDI+  MT G     T VL   ++   F G G  G +A +A I++ A+
Sbjct: 244 GAQAFDIIYVMTKGGPANATSVLIVYIYQQAF-GFGAFGYAAAMASILVVAL 294